Evidence map›Paper›PMID 25350368›Full record

ArticlePloS one2014

The tomato cell death suppressor Adi3 is restricted to the endosomal system in response to the Pseudomonas syringae effector protein AvrPto.

María J Ek-Ramos, Julian Avila, Anna C Nelson Dittrich, Dongyin Su, Joel W Gray, Timothy P Devarenne

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Cargo Recognition and Function of Selective Autophagy Receptors in Plants.International journal of molecular sciences · 2021
    Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

María J Ek-RamosDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America.
Julian AvilaDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America.
Anna C Nelson DittrichDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America.
Dongyin SuDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America.
Joel W GrayDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America.
Timothy P DevarenneDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America.
Texas A&M University · US

Funding

POST DOCTORAL EXCELLENCE IN RESEARCH AND TEACHINGK12GM000708 · NIGMS · UNIVERSITY OF ARIZONA · PI STRAUSFELD, NICHOLAS J · 2000 to 2018
$21.5M
NIGMS NIH HHS K12 GM000708
6 · The paper itself

Abstract

The tomato (Solanum lycopersicum) AGC protein kinase Adi3 functions as a suppressor of cell death and was first identified as an interactor with the tomato resistance protein Pto and the Pseudomonas syringae effector protein AvrPto. Models predict that loss of Adi3 cell death suppression (CDS) activity during Pto/AvrPto interaction leads to the cell death associated with the resistance response initiated from this interaction. Nuclear localization is required for Adi3 CDS. Prevention of nuclear accumulation eliminates Adi3 CDS and induces cell death by localizing Adi3 to intracellular punctate membrane structures. Here we use several markers of the endomembrane system to show that the punctate membrane structures to which non-nuclear Adi3 is localized are endosomal in nature. Wild-type Adi3 also localizes in these punctate endosomal structures. This was confirmed by the use of endosomal trafficking inhibitors, which were capable of trapping wild-type Adi3 in endosomal-like structures similar to the non-nuclear Adi3. This suggests Adi3 may traffic through the cell using the endomembrane system. Additionally, Adi3 was no longer found in the nucleus but was visualized in these punctate endosomal-like membranes during the cell death induced by the Pto/AvrPto interaction. Therefore we propose that inhibiting nuclear import and constraining Adi3 to the endosomal system in response to AvrPto is a mechanism to initiate the cell death associated with resistance.

Indexed as

Gene Expression Regulation, PlantActive Transport, Cell NucleusAgrobacteriumBacterial ProteinsCell DeathCell MembraneCell NucleusCell SurvivalEndosomesGreen Fluorescent ProteinsPlant ProteinsPlasmidsProtein Serine-Threonine KinasesProtoplastsPseudomonas syringaeSolanum lycopersicumavrPto protein, Pseudomonas syringaeBacterial ProteinsGreen Fluorescent ProteinsPlant ProteinsProtein Serine-Threonine KinasesPto protein, Lycopersicon

Identifiers

PMID25350368
PMCPMC4211712
OpenAlexW2025168085

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.