Evidence map›Paper›PMID 25349787›Full record

ArticleInternational journal of ophthalmology2014

Genetic analysis of Chinese families reveals a novel truncation allele of the retinitis pigmentosa GTPase regulator gene.

Fang Hu, Xiang-Yun Zeng, Lin-Lin Liu, Yao-Ling Luo, Yi-Ping Jiang, Hui Wang, Jing Xie, Cheng-Quan Hu, Lin Gan, Liang Huang

Open access · greenAbstract read
In one paragraph

Article in International journal of ophthalmology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact, top 100% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Genotype-Phenotype Analysis ofFrontiers in genetics · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Fang HuDepartment of Ophthalmology, the First Affiliated Hospital, Gannan Medical University, Ganzhou 341000, Jiangxi Province, China.
Xiang-Yun ZengDepartment of Ophthalmology, the First Affiliated Hospital, Gannan Medical University, Ganzhou 341000, Jiangxi Province, China.
Lin-Lin LiuDepartment of Ophthalmology, the First Affiliated Hospital, Gannan Medical University, Ganzhou 341000, Jiangxi Province, China.
Yao-Ling LuoDepartment of Ophthalmology, the First Affiliated Hospital, Gannan Medical University, Ganzhou 341000, Jiangxi Province, China.
Yi-Ping JiangDepartment of Ophthalmology, the First Affiliated Hospital, Gannan Medical University, Ganzhou 341000, Jiangxi Province, China.
Hui WangDepartment of Ophthalmology, the First Affiliated Hospital, Gannan Medical University, Ganzhou 341000, Jiangxi Province, China.
Jing XieDepartment of Ophthalmology, the First Affiliated Hospital, Gannan Medical University, Ganzhou 341000, Jiangxi Province, China.
Cheng-Quan HuDepartment of Ophthalmology, the First Affiliated Hospital, Gannan Medical University, Ganzhou 341000, Jiangxi Province, China.
Lin GanFlaum Eye Institute and Department of Ophthalmology, School of Medicine and Dentistry, University of Rochester, New York 14642, USA.
Liang HuangDepartment of Ophthalmology, the First Affiliated Hospital, Gannan Medical University, Ganzhou 341000, Jiangxi Province, China ; Flaum Eye Institute and Department of Ophthalmology, School of Medicine and Dentistry, University of Rochester, New York 14642, USA.
First Affiliated Hospital of Gannan Medical University · CNUniversity of Rochester · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo make comprehensive molecular diagnosis for retinitis pigmentosa (RP) patients in a consanguineous Han Chinese family using next generation sequencing based Capture-NGS screen technology.

methodsA five-generation Han Chinese family diagnosed as non-syndromic X-linked recessive RP (XLRP) was recruited, including four affected males, four obligate female carriers and eleven unaffected family members. Capture-NGS was performed using a custom designed capture panel covers 163 known retinal disease genes including 47 RP genes, followed by the validation of detected mutation using Sanger sequencing in all recruited family members.

resultsCapture-NGS in one affected 47-year-old male reveals a novel mutation, c.2417_2418insG:p.E806fs, in exon ORF15 of RP GTPase regulator (RPGR) gene results in a frameshift change that results in a premature stop codon and a truncated protein product. The mutation was further validated in three of four affected males and two of four female carriers but not in the other unaffected family members.

conclusionWe have identified a novel mutation, c.2417_2418insG:p.E806fs, in a Han Chinese family with XLRP. Our findings expand the mutation spectrum of RPGR and the phenotypic spectrum of XLRP in Han Chinese families, and confirms Capture-NGS could be an effective and economic approach for the comprehensive molecular diagnosis of RP.

Indexed as

genetic diagnosisnext-generation sequencingretinitis pigmentosaretinitis pigmentosa GTPase regulator

Identifiers

PMID25349787
PMCPMC4206875
OpenAlexW10906904

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.