Evidence map›Paper›PMID 25349427›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Inositol hexakisphosphate kinase-1 mediates assembly/disassembly of the CRL4-signalosome complex to regulate DNA repair and cell death.

Feng Rao, Jing Xu, A Basit Khan, Moataz M Gadalla, Jiyoung Y Cha, Risheng Xu, Richa Tyagi, Yongjun Dang, Anutosh Chakraborty, Solomon H Snyder

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. 5-IPNature metabolism · 2021
    Article
  14. Article
  15. Inositol phosphate kinases in the eukaryote landscape.Advances in biological regulation · 2021
    Article
  16. The Key Role of IPMolecules (Basel, Switzerland) · 2020
    Review
  17. Article
  18. Review
  19. Regulation of Cullin-RING E3 ligase dynamics by Inositol hexakisphosphate.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Feng RaoThe Solomon H. Snyder Department of Neuroscience.
Jing XuThe Solomon H. Snyder Department of Neuroscience.
A Basit KhanThe Solomon H. Snyder Department of Neuroscience.
Moataz M GadallaThe Solomon H. Snyder Department of Neuroscience, Department of Pharmacology and Molecular Sciences, and.
Jiyoung Y ChaThe Solomon H. Snyder Department of Neuroscience.
Risheng XuThe Solomon H. Snyder Department of Neuroscience, Department of Pharmacology and Molecular Sciences, and.
Richa TyagiThe Solomon H. Snyder Department of Neuroscience.
Yongjun DangDepartment of Pharmacology and Molecular Sciences, and.
Anutosh ChakrabortyThe Solomon H. Snyder Department of Neuroscience.
Solomon H SnyderThe Solomon H. Snyder Department of Neuroscience, Department of Pharmacology and Molecular Sciences, and Department of Psychiatry, The Johns Hopkins University School of Medicine, Baltimore, MD 21205 ssnyder@jhmi.edu.
H. L. Snyder Medical Foundation · USLaboratory of Molecular Genetics · PL

Funding

UNDERSTANDING NO SIGNALING RESULTING IN NEUROPROTECTION.P50DA000266 · NIDA · JOHNS HOPKINS UNIVERSITY · PI WORLEY, PAUL F · 1985 to 2017
$45.2M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007309 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COX, ANDREA L · 1985 to 2019
$43.2M
NIDA NIH HHS DA-000266NIDA NIH HHS P50 DA000266NIGMS NIH HHS T32 GM007309
6 · The paper itself

Abstract

Inositol polyphosphates containing an energetic pyrophosphate bond are formed primarily by a family of three inositol hexakisphosphate (IP6) kinases (IP6K1-3). The Cullin-RING ubiquitin ligases (CRLs) regulate diverse biological processes through substrate ubiquitylation. CRL4, comprising the scaffold Cullin 4A/B, the E2-interacting Roc1/2, and the adaptor protein damage-specific DNA-binding protein 1, is activated by DNA damage. Basal CRL4 activity is inhibited by binding to the COP9 signalosome (CSN). UV radiation and other stressors dissociate the complex, leading to E3 ligase activation, but signaling events that trigger signalosome dissociation from CRL4 have been unclear. In the present study, we show that, under basal conditions, IP6K1 forms a ternary complex with CSN and CRL4 in which IP6K1 and CRL4 are inactive. UV dissociates IP6K1 to generate IP7, which then dissociates CSN-CRL4 to activate CRL4. Thus, IP6K1 is a novel CRL4 subunit that transduces UV signals to mediate disassembly of the CRL4-CSN complex, thereby regulating nucleotide excision repair and cell death.

Indexed as

AnimalsCarrier ProteinsCell DeathCOP9 Signalosome ComplexCullin ProteinsDNA RepairHEK293 CellsHumansMiceMultiprotein ComplexesPeptide HydrolasesPhosphotransferases (Phosphate Group Acceptor)Signal TransductionUbiquitin-Protein LigasesUltraviolet RaysCarrier ProteinsCOP9 Signalosome ComplexCullin ProteinsIhpk1 protein, mouseIP6K1 protein, humanMultiprotein ComplexesPeptide HydrolasesPhosphotransferases (Phosphate Group Acceptor)RBX1 protein, humanRBX1 protein, mouseRNF7 protein, humanUbiquitin-Protein LigasesCullin Ring E3 ligasesDNA repairinositol phosphatessignalosomeUV radiation

Identifiers

PMID25349427
PMCPMC4234592
OpenAlexW2038422832

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.