Evidence map›Paper›PMID 25349288›Full record

ArticleMolecular biology and evolution2015

A primitive endogenous lentivirus in a colugo: insights into the early evolution of lentiviruses.

Guan-Zhu Han, Michael Worobey

Open access · bronzeAbstract read
In one paragraph

Article in Molecular biology and evolution, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 31 citations in OpenAlex.

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  5. CD4 receptor diversity represents an ancient protection mechanism against primate lentiviruses.Proceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Guan-Zhu HanDepartment of Ecology and Evolutionary Biology, University of Arizona guanzhu@email.arizona.edu worobey@email.arizona.edu.
Michael WorobeyDepartment of Ecology and Evolutionary Biology, University of Arizona guanzhu@email.arizona.edu worobey@email.arizona.edu.
University of Arizona · US

Funding

Molecular Archeology of HIVR01AI084691 · NIAID · UNIVERSITY OF ARIZONA · PI WOROBEY, MICHAEL · 2011 to 2014
$1.2M
NIAID NIH HHS R01 AI084691
6 · The paper itself

Abstract

Lentiviruses infect a wide range of mammal species. Much remains unknown about their deep history and host distribution. Here, we report the discovery of an endogenous lentivirus within the genome of the Sunda flying lemur (Galeopterus variegatus) (which we designate "Galeopterus variegatus endogenous lentivirus" [GvaELV]). We estimate the GvaELV genome invasion to have occurred more than 14 Ma, supporting an ancient origin of the lentivirus clade and an ancient lentiviral infection in colugo. Phylogenetic analyses show that GvaELV is a sister group of all previously known lentiviruses. The GvaELV genome appears to possess some primitive genomic features of a lentivirus, encoding not only a trans-activator of transcription (tat) gene but also two additional putative accessory genes that share no discernible similarity with other lentiviral accessory genes. The discovery of GvaELV provides novel insights into the prehistory and host distribution of lentivirus.

Indexed as

Genome, ViralAnimalsEndogenous RetrovirusesEvolution, MolecularGenomicsLemurLentiviruses, PrimatePhylogenyDermopteraendogenous retroviruslentivirusphylogenetics

Identifiers

PMID25349288
PMCPMC4271531
OpenAlexW2126581814

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.