ArticleGenome biology and evolution2014
Extensive pericentric rearrangements in the bread wheat (Triticum aestivum L.) genotype "Chinese Spring" revealed from chromosome shotgun sequence data.
Article in Genome biology and evolution, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed.
- Pseudo-linkage or real-linkage of rust resistance genes in a wheat-Thinopyrum intermedium translocation line.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Asymmetric gene expression in grain development of reciprocal crosses between tetraploid and hexaploid wheats.Communications biology · 2022Article
- Article
- Genome-Scale Analysis of Homologous Genes among Subgenomes of Bread Wheat (International journal of molecular sciences · 2020Article
- Fine mapping of root lesion nematode (Pratylenchus thornei) resistance loci on chromosomes 6D and 2B of wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- Identification and validation of a major and stably expressed QTL for spikelet number per spike in bread wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019Article
- Genomes of the wild beets Beta patula and Beta vulgaris ssp. maritima.The Plant journal : for cell and molecular biology · 2019Article
- Reassessment of the evolution of wheat chromosomes 4A, 5A, and 7B.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
- A 55 K SNP array-based genetic map and its utilization in QTL mapping for productive tiller number in common wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
- Concurrent modifications in the three homeologs of Ms45 gene with CRISPR-Cas9 lead to rapid generation of male sterile bread wheat (Triticum aestivum L.).Plant molecular biology · 2018Article
- Genome-wide identification, classification, evolutionary analysis and gene expression patterns of the protein kinase gene family in wheat and Aegilops tauschii.Plant molecular biology · 2017Article
- Wheat Landrace Genome Diversity.Genetics · 2017Article
- Association mapping of leaf rust resistance loci in a spring wheat core collection.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017Article
- Chromosome-specific sequencing reveals an extensive dispensable genome component in wheat.Scientific reports · 2016Article
- Putative interchromosomal rearrangements in the hexaploid wheat (Triticum aestivum L.) genotype 'Chinese Spring' revealed by gene locations on homoeologous chromosomes.BMC evolutionary biology · 2015Article
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7 authors.
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Abstract
The bread wheat (Triticum aestivum L.) genotype "Chinese Spring" ("CS") is the reference base in wheat genetics and genomics. Pericentric rearrangements in this genotype were systematically assessed by analyzing homoeoloci for a set of nonredundant genes from Brachypodium distachyon, Triticum urartu, and Aegilops tauschii in the CS chromosome shotgun sequence obtained from individual chromosome arms flow-sorted from CS aneuploid lines. Based on patterns of their homoeologous arm locations, 551 genes indicated the presence of pericentric inversions in at least 10 of the 21 chromosomes. Available data from deletion bin-mapped expressed sequence tags and genetic mapping in wheat indicated that all inversions had breakpoints in the low-recombinant gene-poor pericentromeric regions. The large number of putative intrachromosomal rearrangements suggests the presence of extensive structural differences among the three subgenomes, at least some of which likely occurred during the production of the aneuploid lines of this hexaploid wheat genotype. These differences could have significant implications in wheat genome research where comparative approaches are used such as in ordering and orientating sequence contigs and in gene cloning.
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