Evidence map›Paper›PMID 25348928›Full record

ArticleBMC medical genetics2014

Fragile X protein in newborn dried blood spots.

Tatyana Adayev, Giuseppe LaFauci, Carl Dobkin, Michele Caggana, Veronica Wiley, Michael Field, Tiffany Wotton, Richard Kascsak, Sarah L Nolin, Anne Glicksman and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

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  10. Reduced vagal tone in women with theJournal of neurodevelopmental disorders · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Tatyana AdayevDepartment of Developmental Biochemistry, New York State Institute for Basic Research in Developmental Disabilities, 1050 Forest Hill Road, Staten Island, New York, 10314, USA. tatyana.adayev@opwdd.ny.gov.
Giuseppe LaFauciDepartment of Developmental Biochemistry, New York State Institute for Basic Research in Developmental Disabilities, 1050 Forest Hill Road, Staten Island, New York, 10314, USA. giuseppe.x.lafauci@opwdd.ny.gov.
Carl DobkinDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, 1050 Forest Hill Road, Staten Island, New York, 10314, USA. carl.dobkin@opwdd.ny.gov.
Michele CagganaWadsworth Center, New York State Department of Health, Albany, New York, USA. mx08@health.state.ny.us.
Veronica WileyNSW Newborn Screening Programme & University of Sydney, Sydney, Australia. veronica.wiley@health.nsw.gov.au.
Michael FieldThe NSW GOLD Service, Hunter Genetics, Newcastle, Australia. geneticfield@gmail.com.
Tiffany WottonNSW Newborn Screening Programme & University of Sydney, Sydney, Australia. tiffany.wotton@health.nsw.gov.au.
Richard KascsakDepartment of Developmental Biochemistry, New York State Institute for Basic Research in Developmental Disabilities, 1050 Forest Hill Road, Staten Island, New York, 10314, USA. richard.kascsak@opwdd.ny.gov.
Sarah L NolinDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, 1050 Forest Hill Road, Staten Island, New York, 10314, USA. sally.nolin@opwdd.ny.gov.
Anne GlicksmanDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, 1050 Forest Hill Road, Staten Island, New York, 10314, USA. anne.glicksman@opwdd.ny.gov.
Nicole HosmerDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, 1050 Forest Hill Road, Staten Island, New York, 10314, USA. nicole.d.ersalesi@opwdd.ny.gov.
W Ted BrownDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, 1050 Forest Hill Road, Staten Island, New York, 10314, USA. ted.brown@opwdd.ny.gov.
New York State Office for People With Developmental Disabilities · USUniversity of Sydney · AUHunter Genetics · AUNew York State Department of Health · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe fragile X syndrome (FXS) results from mutation of the FMR1 gene that prevents expression of its gene product, FMRP. We previously characterized 215 dried blood spots (DBS) representing different FMR1 genotypes and ages with a Luminex-based immunoassay (qFMRP). We found variable FMRP levels in the normal samples and identified affected males by the drastic reduction of FMRP.

methodsHere, to establish the variability of expression of FMRP in a larger random population we quantified FMRP in 2,000 anonymous fresh newborn DBS. We also evaluated the effect of long term storage on qFMRP by retrospectively assaying 74 aged newborn DBS that had been stored for 7-84 months that included normal and full mutation individuals. These analyses were performed on 3 mm DBS disks. To identify the alleles associated with the lowest FMRP levels in the fresh DBS, we analyzed the DNA in the samples that were more than two standard deviations below the mean.

resultsAnalysis of the fresh newborn DBS revealed a broad distribution of FMRP with a mean approximately 7-fold higher than that we previously reported for fresh DBS in normal adults and no samples whose FMRP level indicated FXS. DNA analysis of the lowest FMRP DBS showed that this was the low extreme of the normal range and included a female carrying a 165 CGG repeat premutation. In the retrospective study of aged newborn DBS, the FMRP mean of the normal samples was less than 30% of the mean of the fresh DBS. Despite the degraded signal from these aged DBS, qFMRP identified the FXS individuals.

conclusionsThe assay showed that newborn DBS contain high levels of FMRP that will allow identification of males and potentially females, affected by FXS. The assay is also an effective screening tool for aged DBS stored for up to four years.

Indexed as

Blood PreservationDried Blood Spot TestingFemaleFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeHumansInfant, NewbornMaleRetrospective StudiesTime FactorsFMR1 protein, humanFragile X Messenger Ribonucleoprotein 1

Identifiers

PMID25348928
PMCPMC4412103
OpenAlexW2068325625

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.