ArticleNucleic acids research2015
The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification.
Article in Nucleic acids research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 163 papers.
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163 citing papers in PubMed.
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- Genomic landscape of the emerging XDR Salmonella Typhi for mining druggable targets clpP, hisH, folP and gpmI and screening of novel TCM inhibitors, molecular docking and simulation analyses.BMC microbiology · 2023Article
- The Genome of the Acid Soil-Adapted StrainFrontiers in microbiology · 2022Article
- Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling.PLoS computational biology · 2021Article
- Genome Sequence ofMicrobiology resource announcements · 2021Article
- mMGE: a database for human metagenomic extrachromosomal mobile genetic elements.Nucleic acids research · 2021Article
- Genomes OnLine Database (GOLD) v.8: overview and updates.Nucleic acids research · 2021Article
- A metabolic and physiological design study of Pseudomonas putida KT2440 capable of anaerobic respiration.BMC microbiology · 2021Article
- Characterizing Enterotypes in Human Metagenomics: A Viral Perspective.Frontiers in microbiology · 2021Article
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- *-DCC: A platform to collect, annotate, and explore a large variety of sequencing experiments.GigaScience · 2020Article
- Genome Analyses and Genome-Centered Metatranscriptomics ofMicroorganisms · 2019Article
- Fungal and Bacterial Communities Exhibit Consistent Responses to Reversal of Soil Acidification and Phosphorus Limitation over Time.Microorganisms · 2019Article
- Genes, geology and germs: gut microbiota across a primate hybrid zone are explained by site soil properties, not host species.Proceedings. Biological sciences · 2019Article
103 more citing papers are in PubMed but not listed here.
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Authors and funding
10 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Genomes OnLine Database (GOLD; http://www.genomesonline.org) is a comprehensive online resource to catalog and monitor genetic studies worldwide. GOLD provides up-to-date status on complete and ongoing sequencing projects along with a broad array of curated metadata. Here we report version 5 (v.5) of the database. The newly designed database schema and web user interface supports several new features including the implementation of a four level (meta)genome project classification system and a simplified intuitive web interface to access reports and launch search tools. The database currently hosts information for about 19,200 studies, 56,000 Biosamples, 56,000 sequencing projects and 39,400 analysis projects. More than just a catalog of worldwide genome projects, GOLD is a manually curated, quality-controlled metadata warehouse. The problems encountered in integrating disparate and varying quality data into GOLD are briefly highlighted. GOLD fully supports and follows the Genomic Standards Consortium (GSC) Minimum Information standards.
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