Evidence map›Paper›PMID 25346742›Full record

ArticleFrontiers in plant science2014

Light-dependent expression of flg22-induced defense genes in Arabidopsis.

Satoshi Sano, Mayu Aoyama, Kana Nakai, Koji Shimotani, Kanako Yamasaki, Masa H Sato, Daisuke Tojo, I Nengah Suwastika, Hironari Nomura, Takashi Shiina

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 41 citations in OpenAlex.

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  8. A Novel, Small Cysteine-Rich Effector, RsSCR10 inFrontiers in microbiology · 2021
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  9. Role ofInternational journal of molecular sciences · 2020
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  11. Function analysis and stress-mediatedPlant signaling & behavior · 2020
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  16. mBio · 2017
    Article
  17. Article
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  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Satoshi SanoGraduate School of Life and Environmental Sciences, Kyoto Prefectural University Kyoto, Japan.
Mayu AoyamaGraduate School of Life and Environmental Sciences, Kyoto Prefectural University Kyoto, Japan.
Kana NakaiGraduate School of Life and Environmental Sciences, Kyoto Prefectural University Kyoto, Japan.
Koji ShimotaniGraduate School of Life and Environmental Sciences, Kyoto Prefectural University Kyoto, Japan.
Kanako YamasakiGraduate School of Life and Environmental Sciences, Kyoto Prefectural University Kyoto, Japan.
Masa H SatoGraduate School of Life and Environmental Sciences, Kyoto Prefectural University Kyoto, Japan.
Daisuke TojoGraduate School of Life and Environmental Sciences, Kyoto Prefectural University Kyoto, Japan.
I Nengah SuwastikaBiology Department, Faculty of Science, Tadulako University Palu, Indonesia.
Hironari NomuraDepartment of Health and Nutrition, Gifu Women's University Gifu, Japan.
Takashi ShiinaGraduate School of Life and Environmental Sciences, Kyoto Prefectural University Kyoto, Japan.
Kyoto Prefectural University · JPTadulako University · ID

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chloroplasts have been reported to generate retrograde immune signals that activate defense gene expression in the nucleus. However, the roles of light and photosynthesis in plant immunity remain largely elusive. In this study, we evaluated the effects of light on the expression of defense genes induced by flg22, a peptide derived from bacterial flagellins which acts as a potent elicitor in plants. Whole-transcriptome analysis of flg22-treated Arabidopsis thaliana seedlings under light and dark conditions for 30 min revealed that a number of (30%) genes strongly induced by flg22 (>4.0) require light for their rapid expression, whereas flg22-repressed genes include a significant number of genes that are down-regulated by light. Furthermore, light is responsible for the flg22-induced accumulation of salicylic acid (SA), indicating that light is indispensable for basal defense responses in plants. To elucidate the role of photosynthesis in defense, we further examined flg22-induced defense gene expression in the presence of specific inhibitors of photosynthetic electron transport: 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU) and 2,5-dibromo-3-methyl-6-isopropyl-benzoquinone (DBMIB). Light-dependent expression of defense genes was largely suppressed by DBMIB, but only partially suppressed by DCMU. These findings suggest that photosynthetic electron flow plays a role in controlling the light-dependent expression of flg22-inducible defense genes.

Indexed as

CASDBMIBDCMUdefense geneflg22photosynthesisretrograde signalingsalicylic acid

Identifiers

PMID25346742
PMCPMC4191550
OpenAlexW2036506664

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.