Evidence map›Paper›PMID 25346728›Full record

ArticleFrontiers in microbiology2014

Biogeography rather than association with cyanobacteria structures symbiotic microbial communities in the marine sponge Petrosia ficiformis.

Ilia Burgsdorf, Patrick M Erwin, Susanna López-Legentil, Carlo Cerrano, Markus Haber, Sammy Frenk, Laura Steindler

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 84 citations in OpenAlex.

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  15. Defining and quantifying the core microbiome: Challenges and prospects.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Ilia BurgsdorfDepartment of Marine Biology, Leon H. Charney School of Marine Sciences, University of Haifa Haifa, Israel.
Patrick M ErwinDepartment of Biology and Marine Biology, Center for Marine Science, University of North Carolina Wilmington Wilmington, NC, USA.
Susanna López-LegentilDepartment of Biology and Marine Biology, Center for Marine Science, University of North Carolina Wilmington Wilmington, NC, USA.
Carlo CerranoDepartment of Life and Environmental Sciences (DiSVA), Polytechnic University of Marche Ancona, Italy.
Markus HaberDepartment of Marine Biology, Leon H. Charney School of Marine Sciences, University of Haifa Haifa, Israel.
Sammy FrenkDepartment of Soil, Water, and Environmental Sciences, Agricultural Research Organization - Volcani Center Bet-Dagan, Israel ; Department of Plant Pathology and Microbiology, Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem Rehovot, Israel.
Laura SteindlerDepartment of Marine Biology, Leon H. Charney School of Marine Sciences, University of Haifa Haifa, Israel.
University of Haifa · ILUniversity of North Carolina Wilmington · USAgricultural Research Organization · ILMarche Polytechnic University · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The sponge Petrosia ficiformis is ubiquitous in the Mediterranean Sea and Eastern Atlantic Ocean, hosting a diverse assemblage of bacteria, including, in illuminated sites, cyanobacteria. Two closely related sponge color morphs have been described, one inside caves and at their entrance (white/pink), and one on the rocky cliffs (violet). The presence of the different morphs and their ubiquity in the Mediterranean (from North-West to South-East) provides an opportunity to examine which factors mostly affect the associated microbial communities in this species: (i) presence of phototrophic symbionts or (ii) biogeography. 16S rRNA gene tag pyrosequencing data of the microbial communities revealed that Chloroflexi, Gammaproteobacteria, and Acidobacteria dominated the bacterial communities of all sponges analyzed. Chlorophyll a content, TEM observations and DNA sequence data confirmed the presence of the cyanobacterium Synechococcus feldmannii in violet and pink morphs of P. ficiformis and their absence in white color morphs. Rather than cyanobacterial symbionts (i.e., color morphs) accounting for variability in microbial symbiont communities, a biogeographic trend was observed between P. ficiformis collected in Israel and Italy. Analyses of partial 18S rRNA and mitochondrial cytochrome c oxidase subunit I (COX1) gene sequences revealed consistent genetic divergence between the violet and pink-white morphotypes of P. ficiformis. Overall, data indicated that microbial symbiont communities were more similar in genetically distinct P. ficiformis from the same location, than genetically similar P. ficiformis from distant locations.

Indexed as

454 amplicon pyrosequencingbiogeographycyanobacteriamicrobial diversityPetrosia ficiformisporiferasponge-microbe symbiosisSynechococcus feldmannii

Identifiers

PMID25346728
PMCPMC4193313
OpenAlexW2141721280

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.