Evidence map›Paper›PMID 25346219›Full record

ArticleAnalytical chemistry2014

Sheathless capillary electrophoresis-tandem mass spectrometry for top-down characterization of Pyrococcus furiosus proteins on a proteome scale.

Xuemei Han, Yueju Wang, Aaron Aslanian, Marshall Bern, Mathieu Lavallée-Adam, John R Yates

Abstract read
In one paragraph

Article in Analytical chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
  2. Article
  3. Capillary Electrophoresis-Mass Spectrometry for Top-Down Proteomics.Annual review of analytical chemistry (Palo Alto, Calif.) · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Multidimensional Separations in Top-Down Proteomics.Analytical science advances · 2023
    Article
  9. Review
  10. Article
  11. CE-MS for Proteomics and Intact Protein Analysis.Advances in experimental medicine and biology · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Xuemei HanDepartment of Chemical Physiology, The Scripps Research Institute , 10550 North Torrey Pines Road, La Jolla, California 92037, United States.
Yueju Wang
Aaron Aslanian
Marshall Bern
Mathieu Lavallée-Adam
John R Yates
Scripps Research Institute · USPalo Alto Research Center · USSalk Institute for Biological Studies · US

Funding

TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2012 to 2021
$20.7M
Quantitative Proteome Analysis of Brain DevelopmentR01MH067880 · NIMH · SCRIPPS RESEARCH INSTITUTE, THE · PI YATES III, JOHN R · 2003 to 2017
$7.1M
Advancing Protein Identification for Imaging Mass Spectrometry for PathologyR43GM103352 · NIGMS · PROTEIN METRICS, LLC · PI BERN, MARSHALL WAYNE · 2012 to 2013
$526k
NHLBI NIH HHS HHSN268201000035CNIGMS NIH HHS 8P41GM103533-17NIGMS NIH HHS P41 GM103533NIGMS NIH HHS R43 GM103352NIMH NIH HHS R01 MH067 880NIMH NIH HHS R01 MH067880PHS HHS HHSN2682 01 000 03 5 C
6 · The paper itself

Abstract

Intact protein analysis via top-down mass spectrometry (MS) provides the unique capability of fully characterizing protein isoforms and combinatorial post-translational modifications (PTMs) compared to the bottom-up MS approach. Front-end protein separation poses a challenge for analyzing complex mixtures of intact proteins on a proteomic scale. Here we applied capillary electrophoresis (CE) through a sheathless capillary electrophoresis-electrospray ionization (CESI) interface coupled to an Orbitrap Elite mass spectrometer to profile the proteome from Pyrococcus furiosus. CESI-top-down MS analysis of Pyrococcus furiosus cell lysate identified 134 proteins and 291 proteoforms with a total sample consumption of 270 ng in 120 min of total analysis time. Truncations and various PTMs were detected, including acetylation, disulfide bonds, oxidation, glycosylation, and hypusine. This is the largest scale analysis of intact proteins by CE-top-down MS to date.

Indexed as

ProteomicsTandem Mass SpectrometryArchaeal ProteinsElectrophoresis, CapillaryProteomePyrococcus furiosusArchaeal ProteinsProteome

Identifiers

PMID25346219
PMCPMC4238646
OpenAlexW2323269825

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.