Evidence map›Paper›PMID 25345862›Full record

ReviewBioEssays : news and reviews in molecular, cellular and developmental biology2015

UvrD helicase: an old dog with a new trick: how one step backward leads to many steps forward.

Vitaliy Epshtein

Abstract readReview
In one paragraph

Review in BioEssays : news and reviews in molecular, cellular and developmental biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Formation and Recognition of UV-Induced DNA Damage within Genome Complexity.International journal of molecular sciences · 2020
    Review
  5. Frontiers in molecular biosciences · 2020
    Article
  6. Article
  7. Phylogenomics of Cas4 family nucleases.BMC evolutionary biology · 2017
    Article
  8. Review
  9. Article
  10. Article
  11. A Magic Spot in Genome Maintenance.Trends in genetics : TIG · 2017
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Vitaliy EpshteinDepartment of Biochemistry, New York University, Langhorn Medical Center, New York, NY, USA.
NYU Langone Health · US

Funding

Transcription Termination and its Regulation in E. coliR01GM058750 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NUDLER, EVGENY A · 1999 to 2014
$6.3M
Role of RNA polymerase in DNA stability and repairR01GM107329 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NUDLER, EVGENY A · 2014 to 2017
$1.7M
NIGMS NIH HHS R01 GM058750NIGMS NIH HHS R01-GM107329
6 · The paper itself

Abstract

Transcription-coupled repair (TCR) is a phenomenon that exists in a wide variety of organisms from bacteria to humans. This mechanism allows cells to repair the actively transcribed DNA strand much faster than the non-transcribed one. At the sites of bulky DNA damage RNA polymerase stalls, initiating recruitment of the repair machinery. It is a commonly accepted paradigm that bacterial cells utilize a sole coupling factor, called Mfd to initiate TCR. According to that model, Mfd removes transcription complexes stalled at the lesion site and simultaneously recruits repair machinery. However, this model was recently put in doubt by various discrepancies between the proposed universal role of Mfd in the TCR and its biochemical and phenotypical properties. Here, I present a second pathway of bacterial TCR recently discovered in my laboratory, which does not involve Mfd but implicates a common repair factor, UvrD, in a central position in the process.

Indexed as

AnimalsDNA DamageDNA HelicasesDNA RepairHumansModels, BiologicalTranscription FactorsTranscription, GeneticDNA HelicasesTranscription FactorsDNA repairtranscription-coupled repairUvrD helicase

Identifiers

PMID25345862
PMCPMC4418501
OpenAlexW2314266702

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.