Evidence map›Paper›PMID 25342322›Full record

ArticleInternational journal of molecular sciences2014

Interferon regulatory factor-1 (IRF-1) is involved in the induction of phosphatidylserine receptor (PSR) in response to dsRNA virus infection and contributes to apoptotic cell clearance in CHSE-214 cell.

Hsin-Chia Kung, Øystein Evensen, Jiann-Ruey Hong, Chia-Yu Kuo, Chun-Hsi Tso, Fang-Huar Ngou, Ming-Wei Lu, Jen-Leih Wu

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

  1. Gelated microvesicle-mediated delivery of mesenchymal stem cell mitochondria for the treatment of myocardial infarction.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Hsin-Chia KungInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei 11574, Taiwan. znga.hg@gmail.com.
Øystein EvensenDepartment of Basic Sciences and Aquatic Medicine, Norwegian University of Life Sciences, Oslo 0454, Norway. oystein.evensen@nmbu.no.
Jiann-Ruey HongInstitute of Biotechnology, National Cheng-Kung University, Tainan 70101, Taiwan. jrhong@mail.ncku.edu.tw.
Chia-Yu KuoDepartment of Aquaculture, National Taiwan Ocean University, Keelung 20224, Taiwan. key33_40@hotmail.com.
Chun-Hsi TsoDepartment of Aquaculture, National Taiwan Ocean University, Keelung 20224, Taiwan. chunhsi.tso@hotmail.com.
Fang-Huar NgouDepartment of Aquaculture, National Taiwan Ocean University, Keelung 20224, Taiwan. fanghuar@hotmail.com.
Ming-Wei LuDepartment of Aquaculture, National Taiwan Ocean University, Keelung 20224, Taiwan. mingwei@ntou.edu.tw.
Jen-Leih WuInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei 11574, Taiwan. jlwu@gate.sinica.edu.tw.
National Taiwan Ocean University · TWInstitute of Cellular and Organismic Biology, Academia Sinica · TWNational Cheng Kung University · TWNorwegian University of Life Sciences · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The phosphatidylserine receptor (PSR) recognizes a surface marker on apoptotic cells and initiates engulfment. This receptor is important for effective apoptotic cell clearance and maintains normal tissue homeostasis and regulation of the immune response. However, the regulation of PSR expression remains poorly understood. In this study, we determined that interferon regulatory factor-1 (IRF-1) was dramatically upregulated upon viral infection in the fish cell. We observed apoptosis in virus-infected cells and found that both PSR and IRF-1 increased simultaneously. Based on a bioinformatics promoter assay, IRF-1 binding sites were identified in the PSR promoter. Compared to normal viral infection, we found that PSR expression was delayed, viral replication was increased and virus-induced apoptosis was inhibited following IRF-1 suppression with morpholino oligonucleotides. A luciferase assay to analyze promoter activity revealed a decreasing trend after the deletion of the IRF-1 binding site on PSR promoter. The results of this study indicated that infectious pancreatic necrosis virus (IPNV) infection induced both the apoptotic and interferon (IFN) pathways, and IRF-1 was involved in regulating PSR expression to induce anti-viral effects. Therefore, this work suggests that PSR expression in salmonid cells during IPNV infection is activated when IRF-1 binds the PSR promoter. This is the first report to show the potential role of IRF-1 in triggering the induction of apoptotic cell clearance-related genes during viral infection and demonstrates the extensive crosstalk between the apoptotic and innate immune response pathways.

Indexed as

AnimalsApoptosisBase SequenceBinding SitesBirnaviridae InfectionsCell LineDNA-Binding ProteinsFishesImmunity, InnateInfectious pancreatic necrosis virusInterferon Regulatory Factor-1InterferonsMolecular Sequence DataPromoter Regions, GeneticReceptors, Cell SurfaceRNA VirusesDNA-Binding ProteinsInterferon Regulatory Factor-1Interferonsphosphatidylserine receptorReceptors, Cell Surface

Identifiers

PMID25342322
PMCPMC4227274
OpenAlexW2053261603

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.