ArticlePlant molecular biology2015
De novo sequencing and analysis of the lily pollen transcriptome: an open access data source for an orphan plant species.
Article in Plant molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
13 citing papers in PubMed.
- Transcriptomic Insight into the Pollen Tube Growth ofPlants (Basel, Switzerland) · 2023Article
- Full-length transcriptome-referenced analysis reveals crucial roles of hormone and wounding during induction of aerial bulbils in lily.BMC plant biology · 2022Article
- Identification of a Male Sterile Candidate Gene inFrontiers in plant science · 2022Article
- Two-dimensional analysis provides molecular insight into flower scent of Lilium 'Siberia'.Scientific reports · 2018Article
- Breeding of lilies and tulips-Interspecific hybridization and genetic background.Breeding science · 2018Review
- Identification of differentially expressed genes in flower, leaf and bulb scale of Lilium oriental hybrid 'Sorbonne' and putative control network for scent genes.BMC genomics · 2017Article
- Identification of Proteases and Protease Inhibitors in Allergenic and Non-Allergenic Pollen.International journal of molecular sciences · 2017Article
- Signaling with Ions: The Keystone for Apical Cell Growth and Morphogenesis in Pollen Tubes.Plant physiology · 2017Review
- Bioinformatics resources for pollen.Plant reproduction · 2016Review
- Massively Parallelized Pollen Tube Guidance and Mechanical Measurements on a Lab-on-a-Chip Platform.PloS one · 2016Article
- Evaluation of Reference Genes for Quantitative Real-Time PCR Analysis of the Gene Expression in Laticifers on the Basis of Latex Flow in Rubber Tree (Hevea brasiliensis Muell. Arg.).Frontiers in plant science · 2016Article
- A decade of pollen transcriptomics.Plant reproduction · 2015Review
- Article
Corrections and comments
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Authors and funding
3 authors.
Funding
Abstract
Pollen grains of Lilium longiflorum are a long-established model system for pollen germination and tube tip growth. Due to their size, protein content and almost synchronous germination in synthetic media, they provide a simple system for physiological measurements as well as sufficient material for biochemical studies like protein purifications, enzyme assays, organelle isolation or determination of metabolites during germination and pollen tube elongation. Despite recent progresses in molecular biology techniques, sequence information of expressed proteins or transcripts in lily pollen is still scarce. Using a next generation sequencing strategy (RNAseq), the lily pollen transcriptome was investigated resulting in more than 50 million high quality reads with a length of 90 base pairs. Sequenced transcripts were assembled and annotated, and finally visualized with MAPMAN software tools and compared with other RNAseq or genome data including Arabidopsis pollen, Lilium vegetative tissues and the Amborella trichopoda genome. All lily pollen sequence data are provided as open access files with suitable tools to search sequences of interest.
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Registered trials
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