Evidence map›Paper›PMID 25341664›Full record

ReviewViruses2014

KSHV miRNAs decrease expression of lytic genes in latently infected PEL and endothelial cells by targeting host transcription factors.

Karlie Plaisance-Bonstaff, Hong Seok Choi, Tyler Beals, Brian J Krueger, Isaac W Boss, Lauren A Gay, Irina Haecker, Jianhong Hu, Rolf Renne

Open access · goldAbstract readReview
In one paragraph

Review in Viruses, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Viral miRNA regulation of host gene expression.Seminars in cell & developmental biology · 2023
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. The Role of miRNAs in Virus-Mediated Oncogenesis.International journal of molecular sciences · 2018
    Review
  12. Article
  13. Article
  14. Review
  15. KSHV microRNAs: Tricks of the Devil.Trends in microbiology · 2017
    Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Karlie Plaisance-BonstaffDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, FL 32610, USA. karliebonstaff@gmail.com.
Hong Seok ChoiDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, FL 32610, USA. hschoi@ufl.edu.
Tyler BealsDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, FL 32610, USA. tbeals@ufl.edu.
Brian J KruegerDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, FL 32610, USA. brian.krueger@duke.edu.
Isaac W BossDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, FL 32610, USA. iboss2022@gmail.com.
Lauren A GayDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, FL 32610, USA. lagay@ufl.edu.
Irina HaeckerDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, FL 32610, USA. irina25@me.com.
Jianhong HuDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, FL 32610, USA. Jianhong.Hu@bcm.edu.
Rolf RenneDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, FL 32610, USA. rrenne@ufl.edu.
University of Florida · USUniversity of Florida Health · US

Funding

BASIC MICROBIOLOGY &INFECTIOUS DISEASEST32AI007110 · NIAID · UNIVERSITY OF FLORIDA · PI Stephanie M Karst · 1985 to 2026
$4.3M
TRAINING IN THE CELL BIOLOGY AND IMMUNOBIOLOGY OF CANCERT32CA009126 · NCI · UNIVERSITY OF FLORIDA · PI MAY, WILLIAM STRATFORD · 1985 to 2012
$3.5M
Studying the role of KSHV-encoded miRNAsR01CA119917 · NCI · UNIVERSITY OF FLORIDA · PI RENNE, ROLF F · 2008 to 2017
$3.2M
LANA AND CELLULAR GENE EXPRESSION IN KAPOSIS SARCOMAR01CA088763 · NCI · UNIVERSITY OF FLORIDA · PI RENNE, ROLF F · 2000 to 2015
$3.2M
Building a recombinant Herpesvirus core laboratory to systematically analyze theRC2CA148407 · NCI · UNIVERSITY OF FLORIDA · PI RENNE, ROLF F · 2009 to 2010
$1.0M
Biodefense and Emerging Infectious Diseases (BEID)T32AI060527 · NIAID · UNIVERSITY OF FLORIDA · PI RENNE, ROLF F · 2005 to 2009
$357k
NCI NIH HHS CA 119917NCI NIH HHS CA88763NCI NIH HHS R01 CA088763NCI NIH HHS R01 CA119917NCI NIH HHS RC2 CA148407NCI NIH HHS T32 CA009126NIAID NIH HHS T32 AI007110NIAID NIH HHS T32AI007110NIAID NIH HHS T32 AI060527NIAID NIH HHS T32AI060527
6 · The paper itself

Abstract

Kaposi's sarcoma-associated herpesvirus (KSHV) microRNAs are encoded in the latency-associated region. Knockdown of KSHV miR-K12-3 and miR-K12-11 increased expression of lytic genes in BC-3 cells, and increased virus production from latently infected BCBL-1 cells. Furthermore, iSLK cells infected with miR-K12-3 and miR-K12-11 deletion mutant viruses displayed increased spontaneous reactivation and were more sensitive to inducers of reactivation than cells infected with wild type KSHV. Predicted binding sites for miR-K12-3 and miR-K12-11 were found in the 3'UTRs of the cellular transcription factors MYB, Ets-1, and C/EBPα, which activate RTA, the KSHV replication and transcription activator. Targeting of MYB by miR-K12-11 was confirmed by cloning the MYB 3'UTR downstream from the luciferase reporter. Knockdown of miR‑K12-11 resulted in increased levels of MYB transcript, and knockdown of miR-K12-3 increased both C/EBPα and Ets-1 transcripts. Thus, miR-K12-11 and miR-K12-3 contribute to maintenance of latency by decreasing RTA expression indirectly, presumably via down-regulation of MYB, C/EBPα and Ets-1, and possibly other host transcription factors.

Indexed as

Gene Expression Regulation, ViralCell LineDown-RegulationEndothelial CellsGene Knockdown TechniquesHerpesvirus 8, HumanHumansMicroRNAsReceptors, VirusRNA, ViralSignal TransductionTranscription FactorsViral ProteinsVirus InternalizationVirus LatencyMicroRNAsReceptors, VirusRNA, ViralTranscription FactorsViral Proteins

Identifiers

PMID25341664
PMCPMC4213575
OpenAlexW2057620743

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.