Evidence map›Paper›PMID 25341126›Full record

ArticleEmerging infectious diseases2014

Genomic definition of hypervirulent and multidrug-resistant Klebsiella pneumoniae clonal groups.

Suzanne Bialek-Davenet, Alexis Criscuolo, Florent Ailloud, Virginie Passet, Louis Jones, Anne-Sophie Delannoy-Vieillard, Benoit Garin, Simon Le Hello, Guillaume Arlet, Marie-Hélène Nicolas-Chanoine and 2 more

Abstract read
In one paragraph

Article in Emerging infectious diseases, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 309 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
309citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

309 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. A systematic review of hypervirulentFrontiers in medicine · 2025
    Pooled it
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Genomic analysis ofbioRxiv : the preprint server for biology · 2026
    Article
  12. Article
  13. Observational
  14. Connections betweenInfection and immunity · 2026
    Article
  15. Article
  16. Article
  17. Carriage of hypervirulent and ESBL-producingApplied and environmental microbiology · 2026
    Article
  18. The acquisition ofmBio · 2026
    Article
  19. Antibiotic Resistance inAntibiotics (Basel, Switzerland) · 2026
    Review
  20. Article

249 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Suzanne Bialek-Davenet
Alexis Criscuolo
Florent Ailloud
Virginie Passet
Louis Jones
Anne-Sophie Delannoy-Vieillard
Benoit Garin
Simon Le Hello
Guillaume Arlet
Marie-Hélène Nicolas-Chanoine
Dominique Decré
Sylvain Brisse

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multidrug-resistant and highly virulent Klebsiella pneumoniae isolates are emerging, but the clonal groups (CGs) corresponding to these high-risk strains have remained imprecisely defined. We aimed to identify K. pneumoniae CGs on the basis of genome-wide sequence variation and to provide a simple bioinformatics tool to extract virulence and resistance gene data from genomic data. We sequenced 48 K. pneumoniae isolates, mostly of serotypes K1 and K2, and compared the genomes with 119 publicly available genomes. A total of 694 highly conserved genes were included in a core-genome multilocus sequence typing scheme, and cluster analysis of the data enabled precise definition of globally distributed hypervirulent and multidrug-resistant CGs. In addition, we created a freely accessible database, BIGSdb-Kp, to enable rapid extraction of medically and epidemiologically relevant information from genomic sequences of K. pneumoniae. Although drug-resistant and virulent K. pneumoniae populations were largely nonoverlapping, isolates with combined virulence and resistance features were detected.

Indexed as

GenomicsAnti-Bacterial AgentsCluster AnalysisDrug Resistance, Multiple, BacterialGenome, BacterialHumansKlebsiella InfectionsKlebsiella pneumoniaeMultilocus Sequence TypingPhylogenySerotypingVirulenceAnti-Bacterial Agents

Identifiers

PMID25341126
PMCPMC4214299

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.