Evidence map›Paper›PMID 25340744›Full record

ArticlePloS one2014

Induced mutations in yeast cell populations adapting to an unforeseen challenge.

Lindsay S Moore, Wu Wei, Elad Stolovicki, Tamar Benbenishty, Stefan Wilkening, Lars M Steinmetz, Erez Braun, Lior David

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Metabolic cost of rapid adaptation of single yeast cells.Proceedings of the National Academy of Sciences of the United States of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Lindsay S MooreDepartment of Physics & Network Biology Research Laboratories, Technion-Israel Institute of Technology, Haifa, Israel.
Wu WeiStanford Genome Technology Center, Palo Alto, California, United States of America.
Elad StolovickiDepartment of Physics & Network Biology Research Laboratories, Technion-Israel Institute of Technology, Haifa, Israel.
Tamar BenbenishtyDepartment of Animal Sciences, The Hebrew University of Jerusalem, Rehovot, Israel.
Stefan WilkeningEuropean Molecular Biology Laboratory, Genome Biology Unit, Heidelberg, Germany.
Lars M SteinmetzStanford Genome Technology Center, Palo Alto, California, United States of America; European Molecular Biology Laboratory, Genome Biology Unit, Heidelberg, Germany.
Erez BraunDepartment of Physics & Network Biology Research Laboratories, Technion-Israel Institute of Technology, Haifa, Israel.
Lior DavidDepartment of Animal Sciences, The Hebrew University of Jerusalem, Rehovot, Israel.
Technion – Israel Institute of Technology · ILHebrew University of Jerusalem · ILEuropean Molecular Biology Laboratory · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The modern evolutionary synthesis assumes that mutations occur at random, independently of the environment in which they confer an advantage. However, there are indications that cells facing challenging conditions can adapt rapidly, utilizing processes beyond selection of pre-existing genetic variation. Here, we show that a strong regulatory challenge can induce mutations in many independent yeast cells, in the absence of general mutagenesis. Whole genome sequencing of cell lineages reveals a repertoire of independent mutations within a single lineage that arose only after the cells were exposed to the challenging environment, while other cells in the same lineage adapted without any mutation in their genomes. Thus, our experiments uncovered multiple alternative routes for heritable adaptation that were all induced in the same lineage during a short time period. Our results demonstrate the existence of adaptation mechanisms beyond random mutation, suggesting a tight connection between physiological and genetic processes.

Indexed as

Evolution, MolecularMutationAdaptation, PhysiologicalBlood GlucoseCell SeparationCloning, MolecularFlow CytometryGalactoseGenetic VariationGenome, FungalIncidenceOpen Reading FramesPolymorphism, GeneticSaccharomyces cerevisiaeSelection, GeneticSequence Analysis, DNABlood GlucoseGalactose

Identifiers

PMID25340744
PMCPMC4207790
OpenAlexW2091713250

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.