Evidence map›Paper›PMID 25340731›Full record

ArticlePharmacogenomics2014

Genetic variation in platinating agent and taxane pathway genes as predictors of outcome and toxicity in advanced non-small-cell lung cancer.

Jatinder Kaur Lamba, Brooke L Fridley, Taraswi M Ghosh, Qing Yu, Gaurav Mehta, Pankaj Gupta

Open access · greenAbstract read
In one paragraph

Article in Pharmacogenomics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 35 citations in OpenAlex.

  1. Trial
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  11. Genetic and Modifiable Risk Factors Contributing to Cisplatin-induced Toxicities.Clinical cancer research : an official journal of the American Association for Cancer Research · 2019
    Review
  12. Association between single nucleotide polymorphisms ofCancer management and research · 2019
    Article
  13. Review
  14. Role of Germline Genetics in Identifying Survivors at Risk for Adverse Effects of Cancer Treatment.American Society of Clinical Oncology educational book. American Society of Clinical Oncology. Annual Meeting · 2018
    Review
  15. Article
  16. Review
  17. Clinical and Genome-Wide Analysis of Cisplatin-Induced Peripheral Neuropathy in Survivors of Adult-Onset Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2017
    Article
  18. Review
  19. Review
  20. Pathophysiology of Chemotherapy-Induced Peripheral Neuropathy.Frontiers in molecular neuroscience · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jatinder Kaur LambaDepartment of Experimental & Clinical Pharmacology, PUMA-Institute of Personalized Medicine, University of Minnesota, Minneapolis, MN, USA.
Brooke L Fridley
Taraswi M Ghosh
Qing Yu
Gaurav Mehta
Pankaj Gupta
Minneapolis VA Health Care System · USUniversity of Kansas Medical Center · USUniversity of Minnesota · US

Funding

Pharmacogenomics of Ara-C in AMLR01CA132946 · NCI · UNIVERSITY OF MINNESOTA · PI LAMBA, JATINDER K., POUNDS, STANLEY BARRETT · 2008 to 2025
$5.3M
Impact of genetic variation on response to GO therapy in COG-AML clinical trialsR21CA155524 · NCI · UNIVERSITY OF MINNESOTA · PI LAMBA, JATINDER K., WALTER, ROLAND BRUNO · 2012 to 2013
$439k
Bayesian Integrative Clustering for Determining Molecular Based Cancer SubtyR21CA182715 · NCI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI FRIDLEY, BROOKE L · 2014 to 2015
$377k
Integrative genomic models for analysis of pharmacogenomic studiesR21CA140879 · NCI · MAYO CLINIC ROCHESTER · PI FRIDLEY, BROOKE L · 2009 to 2010
$299k
NCI NIH HHS R01 CA132946NCI NIH HHS R21 CA140879NCI NIH HHS R21 CA155524NCI NIH HHS R21 CA182715
6 · The paper itself

Abstract

aimLung carcinoma is the most common malignancy and the leading cause of cancer deaths worldwide. Although clinical factors including age, performance status and stage influence the likelihood of benefit from and tolerability of chemotherapy, the genetic profile of individual patients may be an independent predictor of response and toxicity. The present study aimed to identify pharmacogenetic markers associated with clinical response and toxicity in patients with advanced non-small cell lung cancer (NSCLC) treated primarily with carboplatin and paclitaxel. MATERIALS &

methodsGenomic DNA samples from 90 adult male patients diagnosed with stage IIIB/IV NSCLC were genotyped for SNPs in candidate genes of relevance to platinating agents and paclitaxel and analyzed for association with survival and toxicities in univariate and multivariate models.

resultsAfter adjusting for performance status and stage, SNPs in the drug transporters ABCB1 and ABCC1, as well as within NQO1 were associated with progression-free survival. With respect to hematological and nonhematological toxicities, SNPs in drug transporters (ABCB1 and ABCG2) were associated with thrombocytopenia, nausea and neutropenia, whereas SNPs in the DNA repair pathway genes ERCC4 and XPC were significantly associated with neutropenia and sensory neuropathy, respectively.

conclusionOur study evaluated and identified SNPs in key candidate genes in platinating agent and taxane pathways associated with outcome and toxicity in advanced NSCLC. If validated in large prospective studies, these findings might provide opportunities to personalize therapeutic strategies.

Indexed as

AgedAged, 80 and overATP-Binding Cassette, Sub-Family C ProteinsATP Binding Cassette Transporter, Subfamily BBridged-Ring CompoundsCarboplatinCarcinoma, Non-Small-Cell LungDisease-Free SurvivalDNA-Binding ProteinsFemaleGenetic Association StudiesHumansMaleMiddle AgedNAD(P)H Dehydrogenase (Quinone)NauseaABCB1 protein, humanATP-Binding Cassette, Sub-Family C ProteinsATP Binding Cassette Transporter, Subfamily BBridged-Ring CompoundsCarboplatinDNA-Binding Proteinsmultidrug resistance-associated protein 1NAD(P)H Dehydrogenase (Quinone)NQO1 protein, humanPaclitaxeltaxaneTaxoidsxeroderma pigmentosum group F proteinXPC protein, humanadverse effectscarboplatinnon-small cell lung cancerpharmacogeneticsprognosissingle nucleotide polymorphismstaxane

Identifiers

PMID25340731
PMCPMC4450105
OpenAlexW2995870042

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.