Evidence map›Paper›PMID 25339581›Full record

ArticleAngewandte Chemie (International ed. in English)2014

Enzymatic fabrication of high-density RNA arrays.

Cheng-Hsien Wu, Matthew T Holden, Lloyd M Smith

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Spotting, Transcription andComputational and structural biotechnology journal · 2019
    Review
  10. High-Density RNA Microarrays Synthesized In Situ by Photolithography.Angewandte Chemie (International ed. in English) · 2018
    Article
  11. Article
  12. Article
  13. Parallel DNA Synthesis on Poly(ethylene terephthalate).Chembiochem : a European journal of chemical biology · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Cheng-Hsien WuDepartment of Chemistry, University of Wisconsin at Madison, 1101 University Avenue, Madison, WI 53706 (USA).
Matthew T Holden
Lloyd M Smith

Funding

BIOTECHNOLOGY TRAINING PROGRAMT32GM008349 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI FOX, BRIAN G · 1989 to 2019
$22.5M
QPASS: Quantitative Parallel Aptamer Selection SystemU54DK093467 · NIDDK · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI SMITH, LLOYD M, SOH, HYONGSOK TOM · 2011 to 2013
$3.2M
Development and Applications of High Density RNA ArraysR01GM108727 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI SMITH, LLOYD M · 2014 to 2017
$1.1M
NIDDK NIH HHS 1U54DK093467-01NIDDK NIH HHS U54 DK093467NIGMS NIH HHS 1 R01 GM108727-01A1NIGMS NIH HHS 5T32GM08349NIGMS NIH HHS R01 GM108727NIGMS NIH HHS T32 GM008349
6 · The paper itself

Abstract

A powerful new strategy for the fabrication of high-density RNA arrays is described. A high-density DNA array is fabricated by standard photolithographic methods, the surface-bound DNA molecules are enzymatically copied into their RNA complements from a surface-bound RNA primer, and the DNA templates are enzymatically destroyed, leaving behind the desired RNA array. The strategy is compatible with 2'-fluoro-modified (2'F) ribonucleoside triphosphates (rNTPs), which may be included in the polymerase extension reaction to impart nuclease resistance and other desirable characteristics to the synthesized RNAs. The use and fidelity of the arrays are explored with DNA hybridization, DNAzyme cleavage, and nuclease digestion experiments.

Indexed as

Oligonucleotide Array Sequence AnalysisDNA, CatalyticHalogenationNucleic Acid HybridizationRNAThionucleotidesDNA, CatalyticRNAThionucleotidesDNAzymesmaskless array synthesismicroarraysnucleic acidsphotolithography

Identifiers

PMID25339581
PMCPMC4319565

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.