Evidence map›Paper›PMID 25339398›Full record

ArticleJournal of clinical microbiology2015

Nontoxigenic Vibrio cholerae non-O1/O139 isolate from a case of human gastroenteritis in the U.S. Gulf Coast.

Nur A Hasan, Talayeh Rezayat, Peter J Blatz, Seon Young Choi, Kimberly J Griffitt, Shah M Rashed, Anwar Huq, Nicholas G Conger, Rita R Colwell, D Jay Grimes

Abstract readCase Reports
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of clinical microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Public health aspects ofEFSA journal. European Food Safety Authority · 2024
    Article
  2. Non-O1/Non-O139Microorganisms · 2024
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. A Strategy for the Rapid Development of a SafeInternational journal of molecular sciences · 2021
    Article
  8. Article
  9. Article
  10. Septicemia secondary toBMJ case reports · 2019
    Article
  11. Article
  12. Combating Cholera.F1000Research · 2019
    Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Nur A HasanMaryland Pathogen Research Institute, University of Maryland, College Park, Maryland, USA University of Maryland Institute for Advanced Computer Studies, University of Maryland, College Park, Maryland, USA CosmosID, Inc., College Park, Maryland, USA.
Talayeh RezayatKeesler Air Force Base, Biloxi, Mississippi, USA.
Peter J BlatzKeesler Air Force Base, Biloxi, Mississippi, USA.
Seon Young ChoiMaryland Pathogen Research Institute, University of Maryland, College Park, Maryland, USA CosmosID, Inc., College Park, Maryland, USA.
Kimberly J GriffittGulf Coast Research Laboratory, The University of Southern Mississippi, Ocean Springs, Mississippi, USA.
Shah M RashedMaryland Pathogen Research Institute, University of Maryland, College Park, Maryland, USA.
Anwar HuqMaryland Pathogen Research Institute, University of Maryland, College Park, Maryland, USA Institute for Applied Environmental Health, University of Maryland, College Park, Maryland, USA.
Nicholas G CongerKeesler Air Force Base, Biloxi, Mississippi, USA.
Rita R ColwellMaryland Pathogen Research Institute, University of Maryland, College Park, Maryland, USA University of Maryland Institute for Advanced Computer Studies, University of Maryland, College Park, Maryland, USA CosmosID, Inc., College Park, Maryland, USA Institute for Applied Environmental Health, University of Maryland, College Park, Maryland, USA Bloomberg School of Public Health, Johns Hopkins University, Baltimore, Maryland, USA.
D Jay GrimesGulf Coast Research Laboratory, The University of Southern Mississippi, Ocean Springs, Mississippi, USA jay.grimes@usm.edu.

Funding

PHS HHS 1R01A1039129
6 · The paper itself

Abstract

An occurrence of Vibrio cholerae non-O1/O139 gastroenteritis in the U.S. Gulf Coast is reported here. Genomic analysis revealed that the isolate lacked known virulence factors associated with the clinical outcome of a V. cholerae infection but did contain putative genomic islands and other accessory virulence factors. Many of these factors are widespread among environmental strains of V. cholerae, suggesting that there might be additional virulence factors in non-O1/O139 V. cholerae yet to be determined. Phylogenetic analysis revealed that the isolate belonged to a phyletic lineage of environmental V. cholerae isolates associated with sporadic cases of gastroenteritis in the Western Hemisphere, suggesting a need to monitor non-O1/O139 V. cholerae in the interest of public health.

Indexed as

AdultChromosome MappingCluster AnalysisComputational BiologyGastroenteritisGene OrderGenes, BacterialGenome, BacterialHumansMaleMolecular TypingPhylogenyUnited StatesVibrio cholerae non-O1Vibrio InfectionsVirulence FactorsVirulence Factors

Identifiers

PMID25339398
PMCPMC4290964

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.