Evidence map›Paper›PMID 25339359›Full record

ArticleBlood2014

Isolation and transcriptome analyses of human erythroid progenitors: BFU-E and CFU-E.

Jie Li, John Hale, Pooja Bhagia, Fumin Xue, Lixiang Chen, Julie Jaffray, Hongxia Yan, Joseph Lane, Patrick G Gallagher, Narla Mohandas and 2 more

Abstract read
In one paragraph

Article in Blood, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 125 papers.

0numbers the graph read from it
0cells of the map it votes in
125citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

125 citing papers in PubMed.

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65 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jie LiLaboratory of Membrane Biology.
John HaleRed Cell Physiology Laboratory, New York Blood Center, New York, NY;
Pooja BhagiaRed Cell Physiology Laboratory, New York Blood Center, New York, NY; Pediatric Oncology, Memorial Sloan-Kettering Cancer Center, New York, NY;
Fumin XueLaboratory of Membrane Biology.
Lixiang ChenLaboratory of Membrane Biology.
Julie JaffrayRed Cell Physiology Laboratory, New York Blood Center, New York, NY; Pediatric Oncology, Memorial Sloan-Kettering Cancer Center, New York, NY;
Hongxia YanRed Cell Physiology Laboratory, New York Blood Center, New York, NY;
Joseph LaneDepartment of Orthopedic Surgery, The New York Presbyterian Cornell Hospital, New York, NY;
Patrick G GallagherDepartments of Pediatrics, Pathology and Genetics, Yale University School of Medicine, New Haven, CT;
Narla MohandasRed Cell Physiology Laboratory, New York Blood Center, New York, NY;
Jing LiuState Key Laboratory of Medical Genetics and School of Life Science, Central South University, Changsha, Hunan, China; and.
Xiuli AnLaboratory of Membrane Biology, College of Life Science, Zhengzhou University, Zhengzhou, Henan, China.

Funding

RED CELL DEFORMABILITY IN VITRO AND SURVIVAL IN VIVOR37DK026263 · NIDDK · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI NARLA, MOHANDAS · 1995 to 2017
$4.5M
Barrier Insulators in ErythropoiesisR01HL106184 · NHLBI · YALE UNIVERSITY · PI GALLAGHER, PATRICK G · 2011 to 2014
$1.6M
RED CELL DEFORMABILITY IN VITRO AND SURVIVAL IN VIVOR01DK026263 · NIDDK · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI NARLA, MOHANDAS · 1986 to 2007
$1.6M
TET3 in Terminal Erythroid DifferentiationR01DK100810 · NIDDK · NEW YORK BLOOD CENTER · PI AN, XIULI · 2014 to 2016
$875k
NHLBI NIH HHS HL106184NHLBI NIH HHS R01 HL106184NIDDK NIH HHS DK100810NIDDK NIH HHS DK26263NIDDK NIH HHS R01 DK026263NIDDK NIH HHS R01 DK100810NIDDK NIH HHS R37 DK026263
6 · The paper itself

Abstract

Burst-forming unit-erythroid (BFU-E) and colony-forming unit-erythroid (CFU-E) cells are erythroid progenitors traditionally defined by colony assays. We developed a flow cytometry-based strategy for isolating human BFU-E and CFU-E cells based on the changes in expression of cell surface markers during in vitro erythroid cell culture. BFU-E and CFU-E are characterized by CD45(+)GPA(-)IL-3R(-)CD34(+)CD36(-)CD71(low) and CD45(+)GPA(-)IL-3R(-)CD34(-)CD36(+)CD71(high) phenotypes, respectively. Colony assays validated phenotypic assignment giving rise to BFU-E and CFU-E colonies, both at a purity of ∼90%. The BFU-E colony forming ability of CD45(+)GPA(-)IL-3R(-)CD34(+)CD36(-)CD71(low) cells required stem cell factor and erythropoietin, while the CFU-E colony forming ability of CD45(+)GPA(-)IL-3R(-)CD34(-)CD36(+)CD71(high) cells required only erythropoietin. Bioinformatic analysis of the RNA-sequencing data revealed unique transcriptomes at each differentiation stage. The sorting strategy was validated in uncultured primary cells isolated from bone marrow, cord blood, and peripheral blood, indicating that marker expression is not an artifact of in vitro cell culture, but represents an in vivo characteristic of erythroid progenitor populations. The ability to isolate highly pure human BFU-E and CFU-E progenitors will enable detailed cellular and molecular characterization of these distinct progenitor populations and define their contribution to disordered erythropoiesis in inherited and acquired hematologic disease. Our data provides an important resource for future studies of human erythropoiesis.

Indexed as

Antigens, DifferentiationCell SeparationErythroid Precursor CellsErythropoiesisErythropoietinFemaleGene Expression RegulationHumansMaleTranscriptomeAntigens, DifferentiationEPO protein, humanErythropoietin

Identifiers

PMID25339359
PMCPMC4256913

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.