Evidence map›Paper›PMID 25339316›Full record

ArticleScientific reports2014

Disease-targeted sequencing of ion channel genes identifies de novo mutations in patients with non-familial Brugada syndrome.

Jyh-Ming Jimmy Juang, Tzu-Pin Lu, Liang-Chuan Lai, Chia-Chuan Ho, Yen-Bin Liu, Chia-Ti Tsai, Lian-Yu Lin, Chih-Chieh Yu, Wen-Jone Chen, Fu-Tien Chiang and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Review
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  9. Kir5.1 channels: potential role in epilepsy and seizure disorders.American journal of physiology. Cell physiology · 2022
    Review
  10. Review
  11. Review
  12. Deletion ofFrontiers in cell and developmental biology · 2021
    Article
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  16. Epilepsy and brain channelopathies from infancy to adulthood.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2020
    Review
  17. Phactr1 regulates Slack (KCNT1) channels via protein phosphatase 1 (PP1).FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article
  18. Article
  19. Analyses of epithelial NaThe Journal of biological chemistry · 2019
    Article
  20. Genetic mutation of Kcnj16 identifies Kir5.1-containing channels as key regulators of acute and chronic pH homeostasis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Jyh-Ming Jimmy Juang1] Cardiovascular Center and Division of Cardiology, Department of Internal Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, National Taiwan University Hospital Taipei, 10002, Taiwan [2] Graduate Institute of Physiology, National Taiwan University, Taipei 10617, Taiwan.
Tzu-Pin LuDepartment of Public Health, Graduate Institute of Epidemiology and Preventive Medicine, National Taiwan University, Taipei 10617, Taiwan.
Liang-Chuan LaiGraduate Institute of Physiology, National Taiwan University, Taipei 10617, Taiwan.
Chia-Chuan HoGraduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei 10617, Taiwan.
Yen-Bin LiuCardiovascular Center and Division of Cardiology, Department of Internal Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, National Taiwan University Hospital Taipei, 10002, Taiwan.
Chia-Ti TsaiCardiovascular Center and Division of Cardiology, Department of Internal Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, National Taiwan University Hospital Taipei, 10002, Taiwan.
Lian-Yu LinCardiovascular Center and Division of Cardiology, Department of Internal Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, National Taiwan University Hospital Taipei, 10002, Taiwan.
Chih-Chieh YuCardiovascular Center and Division of Cardiology, Department of Internal Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, National Taiwan University Hospital Taipei, 10002, Taiwan.
Wen-Jone ChenCardiovascular Center and Division of Cardiology, Department of Internal Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, National Taiwan University Hospital Taipei, 10002, Taiwan.
Fu-Tien ChiangCardiovascular Center and Division of Cardiology, Department of Internal Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, National Taiwan University Hospital Taipei, 10002, Taiwan.
Shih-Fan Sherri YehDepartment of Environmental and Occupational Medicine, National Taiwan University Hospital Taipei, 10002, Taiwan.
Ling-Ping LaiCardiovascular Center and Division of Cardiology, Department of Internal Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, National Taiwan University Hospital Taipei, 10002, Taiwan.
Eric Y ChuangGraduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei 10617, Taiwan.
Jiunn-Lee LinCardiovascular Center and Division of Cardiology, Department of Internal Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, National Taiwan University Hospital Taipei, 10002, Taiwan.
National Taiwan University Hospital · TWNational Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brugada syndrome (BrS) is one of the ion channelopathies associated with sudden cardiac death (SCD). The most common BrS-associated gene (SCN5A) only accounts for approximately 20-25% of BrS patients. This study aims to identify novel mutations across human ion channels in non-familial BrS patients without SCN5A variants through disease-targeted sequencing. We performed disease-targeted multi-gene sequencing across 133 human ion channel genes and 12 reported BrS-associated genes in 15 unrelated, non-familial BrS patients without SCN5A variants. Candidate variants were validated by mass spectrometry and Sanger sequencing. Five de novo mutations were identified in four genes (SCNN1A, KCNJ16, KCNB2, and KCNT1) in three BrS patients (20%). Two of the three patients presented SCD and one had syncope. Interestingly, the two patients presented with SCD had compound mutations (SCNN1A:Arg350Gln and KCNB2:Glu522Lys; SCNN1A:Arg597* and KCNJ16:Ser261Gly). Importantly, two SCNN1A mutations were identified from different families. The KCNT1:Arg1106Gln mutation was identified in a patient with syncope. Bioinformatics algorithms predicted severe functional interruptions in these four mutation loci, suggesting their pivotal roles in BrS. This study identified four novel BrS-associated genes and indicated the effectiveness of this disease-targeted sequencing across ion channel genes for non-familial BrS patients without SCN5A variants.

Indexed as

Brugada SyndromeDeath, Sudden, CardiacDNA Mutational AnalysisEpithelial Sodium ChannelsGenetic Association StudiesHigh-Throughput Nucleotide SequencingHumansKir5.1 ChannelMutationNAV1.5 Voltage-Gated Sodium ChannelNerve Tissue ProteinsPotassium ChannelsPotassium Channels, Inwardly RectifyingPotassium Channels, Sodium-ActivatedShab Potassium ChannelsEpithelial Sodium ChannelsKCNB2 protein, humanKCNJ16 protein, humanKCNT1 protein, humanKir5.1 ChannelNAV1.5 Voltage-Gated Sodium ChannelNerve Tissue ProteinsPotassium ChannelsPotassium Channels, Inwardly RectifyingPotassium Channels, Sodium-ActivatedSCN5A protein, humanSCNN1A protein, humanShab Potassium Channels

Identifiers

PMID25339316
PMCPMC4206841
OpenAlexW2074552271

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.