Evidence map›Paper›PMID 25338825›Full record

ArticleGlycoconjugate journal2014

UDP-N-acetyl-α-D-galactosamine:polypeptide N-acetylgalactosaminyl-transferase from the snail Biomphalaria glabrata - substrate specificity and preference of glycosylation sites.

Christopher Taus, Markus Windwarder, Friedrich Altmann, Reingard Grabherr, Erika Staudacher

Abstract read
In one paragraph

Article in Glycoconjugate journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Mucin-Type O-Glycosylation in Invertebrates.Molecules (Basel, Switzerland) · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Christopher TausDepartment of Chemistry, Glycobiology, University of Natural Resources and Life Sciences, Muthgasse 18, 1190, Vienna, Austria, christopher.taus@meduniwien.ac.at.
Markus Windwarder
Friedrich Altmann
Reingard Grabherr
Erika Staudacher

Funding

Austrian Science Fund FWF P 22118
6 · The paper itself

Abstract

O-glycosylation is a widely occurring posttranslational modification of proteins. The glycosylation status of a specific site may influence the location, activity and function of a protein. The initiating enzyme of mucin-type O-glycosylation is UDP-GalNAc:polypeptide GalNAc transferase (ppGalNAcT; EC 2.4.1.41). Using electron-transfer dissociation mass spectrometry, ppGalNAcT from the snail Biomphalaria glabrata was characterized regarding its ability to glycosylate threonine and serine residues in different peptide sequence environments. The preferences of the snail enzyme for flanking amino acids of the potential glycosylation site were very similar to vertebrate and insect members of the family. Acceptor sites with adjacent proline residues were highly preferred, while other residues caused less pronounced effects. No specific O-glycosylation consensus sequence was found. The results obtained from synthetic peptides were in good correlation with the observed glycosylation patterns of native peptides and with the order of attachment in a multi-glycosylated peptide. The snail enzyme clearly preferred threonine over serine in the in vitro assays. No significant differences of transfer speed or efficiency could be detected using a mutant of the enzyme lacking the lectin domain. This is the first characterisation of the substrate specificity of a member of the ppGalNAcT family from mollusc origin.

Indexed as

AcetylgalactosamineAcetylglucosamineAmino Acid MotifsAnimalsBinding SitesBiomphalariaGalactoseGene ExpressionGlucoseGlycosylationKineticsMolecular Sequence DataN-AcetylgalactosaminyltransferasesPeptidesPolypeptide N-acetylgalactosaminyltransferaseProtein BindingAcetylgalactosamineAcetylglucosamineGalactoseGlucoseN-AcetylgalactosaminyltransferasesPeptidesPolypeptide N-acetylgalactosaminyltransferaseRecombinant ProteinsSerineThreonine

Identifiers

PMID25338825
PMCPMC4245494

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.