Evidence map›Paper›PMID 25337968›Full record

ArticlePloS one2014

Regulation of 53BP1 protein stability by RNF8 and RNF168 is important for efficient DNA double-strand break repair.

Yiheng Hu, Chao Wang, Kun Huang, Fen Xia, Jeffrey D Parvin, Neelima Mondal

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. The Role of Protein Arginine Methyltransferases in DNA Damage Response.International journal of molecular sciences · 2022
    Review
  4. Article
  5. Article
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  11. Lipolytic inhibitor G0S2 modulates glioma stem-like cell radiation response.Journal of experimental & clinical cancer research : CR · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. CHD1 loss sensitizes prostate cancer to DNA damaging therapy by promoting error-prone double-strand break repair.Annals of oncology : official journal of the European Society for Medical Oncology · 2017
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Yiheng HuDepartment of Biomedical Informatics, The Ohio State University, Columbus, Ohio, United States of America.
Chao WangDepartment of Biomedical Informatics, The Ohio State University, Columbus, Ohio, United States of America.
Kun HuangDepartment of Biomedical Informatics, The Ohio State University, Columbus, Ohio, United States of America.
Fen XiaDepartment of Radiation Oncology, The Ohio State University, Columbus, Ohio, United States of America.
Jeffrey D ParvinDepartment of Biomedical Informatics, The Ohio State University, Columbus, Ohio, United States of America.
Neelima MondalSchool of Life Sciences, Jawaharlal Nehru University, New Delhi, India.
The Ohio State University · USJawaharlal Nehru University · IN

Funding

Informatics methods for identifying breast cancer control genes and proteinsR01CA141090 · NCI · OHIO STATE UNIVERSITY · PI CATALYUREK, UMIT V., HUANG, KUN · 2009 to 2013
$2.2M
NCI NIH HHS CA141090NCI NIH HHS R01 CA141090
6 · The paper itself

Abstract

53BP1 regulates DNA double-strand break (DSB) repair. In functional assays for specific DSB repair pathways, we found that 53BP1 was important in the conservative non-homologous end-joining (C-NHEJ) pathway, and this activity was dependent upon RNF8 and RNF168. We observed that 53BP1 protein was diffusely abundant in nuclei, and upon ionizing radiation, 53BP1 was everywhere degraded except at DNA damage sites. Depletion of RNF8 or RNF168 blocked the degradation of the diffusely localized nuclear 53BP1, and ionizing radiation induced foci (IRIF) did not form. Furthermore, when 53BP1 degradation was inhibited, a subset of 53BP1 was bound to DNA damage sites but bulk, unbound 53BP1 remained in the nucleoplasm, and localization of its downstream effector RIF1 at DSBs was abolished. Our data suggest a novel mechanism for responding to DSB that upon ionizing radiation, 53BP1 was divided into two populations, ensuring functional DSB repair: damage site-bound 53BP1 whose binding signal is known to be generated by RNF8 and RNF168; and unbound bulk 53BP1 whose ensuing degradation is regulated by RNF8 and RNF168.

Indexed as

DNA-Binding ProteinsDNA Breaks, Double-StrandedDNA End-Joining RepairHeLa CellsHumansIntracellular Signaling Peptides and ProteinsProtein StabilityProtein TransportProteolysisTelomere-Binding ProteinsTumor Suppressor p53-Binding Protein 1Ubiquitin-Protein LigasesDNA-Binding ProteinsIntracellular Signaling Peptides and ProteinsRif1 protein, humanRNF168 protein, humanRNF8 protein, humanTelomere-Binding ProteinsTP53BP1 protein, humanTumor Suppressor p53-Binding Protein 1Ubiquitin-Protein Ligases

Identifiers

PMID25337968
PMCPMC4206297
OpenAlexW1968986906

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.