Evidence map›Paper›PMID 25336735›Full record

ReviewDevelopment (Cambridge, England)2014

Making designer mutants in model organisms.

Ying Peng, Karl J Clark, Jarryd M Campbell, Magdalena R Panetta, Yi Guo, Stephen C Ekker

Abstract readReview
In one paragraph

Review in Development (Cambridge, England), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Structural Evaluation and Conformational Dynamics ofBioengineering (Basel, Switzerland) · 2022
    Article
  5. Speciation and adaptation research meets genome editing.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Review
  6. Review
  7. Tips, Tricks, and Potential Pitfalls of CRISPR Genome Editing inFrontiers in bioengineering and biotechnology · 2022
    Review
  8. Article
  9. Screening Platforms for Genetic Epilepsies-Zebrafish, iPSC-Derived Neurons, and Organoids.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2021
    Review
  10. Article
  11. Article
  12. Embryo, larval, and juvenile staging of Lytechinus pictus from fertilization through sexual maturation.Developmental dynamics : an official publication of the American Association of Anatomists · 2020
    Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Functional testing of a humanDisease models & mechanisms · 2018
    Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ying PengDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN 55905, USA peng.ying@mayo.edu ekker.stephen@mayo.edu.
Karl J ClarkDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN 55905, USA Mayo Addiction Research Center, Mayo Clinic, Rochester, MN 55905, USA Center for Clinical and Translational Science, Mayo Clinic, Rochester, MN 55905, USA.
Jarryd M CampbellDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN 55905, USA Mayo Addiction Research Center, Mayo Clinic, Rochester, MN 55905, USA Center for Clinical and Translational Science, Mayo Clinic, Rochester, MN 55905, USA.
Magdalena R PanettaInSciEd Out and Mayo High School, Rochester Art Center, Mayo Clinic, Rochester, MN 55905, USA.
Yi GuoDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN 55905, USA Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Stephen C EkkerDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN 55905, USA Mayo Addiction Research Center, Mayo Clinic, Rochester, MN 55905, USA Center for Clinical and Translational Science, Mayo Clinic, Rochester, MN 55905, USA InSciEd Out and Mayo High School, Rochester Art Center, Mayo Clinic, Rochester, MN 55905, USA peng.ying@mayo.edu ekker.stephen@mayo.edu.

Funding

Mayo Clinic Center for Translational Science ActivitiesUL1TR000135 · NCATS · MAYO CLINIC ROCHESTER · PI KHOSLA, SUNDEEP · 2012 to 2015
$41.2M
PILOT AND FEASIBILTY PROGRAMP30DK084567 · NIDDK · MAYO CLINIC ROCHESTER · PI GREGORY J. GORES · 2009 to 2026
$22.2M
Pilot and FeasibilityP30DK090728 · NIDDK · MAYO CLINIC ROCHESTER · PI ROMERO, MICHAEL F. · 2010 to 2019
$11.8M
Systematic Vertebrate Functional GenomicsR01GM063904 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI EKKER, STEPHEN CARL · 2001 to 2025
$10.7M
Mayo Clinic Center for Translational Science ActivitiesTL1TR000137 · NCATS · MAYO CLINIC ROCHESTER · PI KHOSLA, SUNDEEP · 2012 to 2015
$2.1M
Systematic Vertebrate Functional GenomicsR56GM063904 · NIGMS · MAYO CLINIC ROCHESTER · PI EKKER, STEPHEN CARL · 2009 to 2010
$611k
NCATS NIH HHS TL1 TR000137NCATS NIH HHS UL1 TR000135NCATS NIH HHS UL1TR000135NIDDK NIH HHS P30 DK084567NIDDK NIH HHS P30DK084567NIDDK NIH HHS P30 DK090728NIDDK NIH HHS P30DK090728NIDDK NIH HHS P30DK84567NIGMS NIH HHS GM63904NIGMS NIH HHS R01 GM063904NIGMS NIH HHS R56 GM063904
6 · The paper itself

Abstract

Recent advances in the targeted modification of complex eukaryotic genomes have unlocked a new era of genome engineering. From the pioneering work using zinc-finger nucleases (ZFNs), to the advent of the versatile and specific TALEN systems, and most recently the highly accessible CRISPR/Cas9 systems, we now possess an unprecedented ability to analyze developmental processes using sophisticated designer genetic tools. In this Review, we summarize the common approaches and applications of these still-evolving tools as they are being used in the most popular model developmental systems. Excitingly, these robust and simple genomic engineering tools also promise to revolutionize developmental studies using less well established experimental organisms.

Indexed as

AnimalsClustered Regularly Interspaced Short Palindromic RepeatsDeoxyribonucleasesGenetic EngineeringHumansMutationZinc FingersDeoxyribonucleasesClustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated systems (Cas9)Genome engineeringModel organismsTranscription activator-like effector nuclease (TALEN)Zinc finger nuclease (ZFN)

Identifiers

PMID25336735
PMCPMC4302887

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.