Evidence map›Paper›PMID 25336726›Full record

ArticleThe Journal of infectious diseases2015

Diversity-oriented synthesis probe targets Plasmodium falciparum cytochrome b ubiquinone reduction site and synergizes with oxidation site inhibitors.

Amanda K Lukens, Richard W Heidebrecht, Carol Mulrooney, Jennifer A Beaudoin, Eamon Comer, Jeremy R Duvall, Mark E Fitzgerald, Daniela Masi, Kevin Galinsky, Christina A Scherer and 6 more

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. MalDA, Accelerating Malaria Drug Discovery.Trends in parasitology · 2021
    Review
  7. Selection ofProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Amanda K LukensInfectious Disease Initiative, The Broad Institute, Cambridge Department of Immunology and Infectious Diseases, Harvard School of Public Health, Boston.
Richard W HeidebrechtInfectious Disease Initiative, The Broad Institute, Cambridge.
Carol MulrooneyTherapeutics Platform.
Jennifer A BeaudoinTherapeutics Platform.
Eamon ComerTherapeutics Platform.
Jeremy R DuvallTherapeutics Platform.
Mark E FitzgeraldTherapeutics Platform.
Daniela MasiTherapeutics Platform.
Kevin GalinskyGenome Sequence and Analysis Program.
Christina A SchererTherapeutics Platform.
Michelle PalmerTherapeutics Platform.
Benito MunozTherapeutics Platform.
Michael FoleyTherapeutics Platform.
Stuart L SchreiberCenter for the Science of Therapeutics, The Broad Institute, Cambridge, Massachusetts.
Roger C WiegandInfectious Disease Initiative, The Broad Institute, Cambridge.
Dyann F WirthInfectious Disease Initiative, The Broad Institute, Cambridge Department of Immunology and Infectious Diseases, Harvard School of Public Health, Boston.

Funding

User Driven ProjectU54HG005032 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SCHREIBER, STUART L · 2008 to 2013
$88.1M
Training Grant in Quantitative Sciences for Cancer ResearchT32CA009337 · NCI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI QUACKENBUSH, JOHN, TRIPPA, LORENZO · 1986 to 2025
$12.3M
Targeting the Mitochondrion of P. falciparumR01AI093716 · NIAID · HARVARD SCHOOL OF PUBLIC HEALTH · PI WIRTH, DYANN F · 2012 to 2020
$4.8M
NHGRI NIH HHS 1U54HG005032-1NHGRI NIH HHS U54 HG005032NIAID NIH HHS AI093716-01A1NIAID NIH HHS R01 AI093716
6 · The paper itself

Abstract

backgroundThe emergence and spread of drug resistance to current antimalarial therapies remains a pressing concern, escalating the need for compounds that demonstrate novel modes of action. Diversity-Oriented Synthesis (DOS) libraries bridge the gap between conventional small molecule and natural product libraries, allowing the interrogation of more diverse chemical space in efforts to identify probes of novel parasite pathways.

methodsWe screened and optimized a probe from a DOS library using whole-cell phenotypic assays. Resistance selection and whole-genome sequencing approaches were employed to identify the cellular target of the compounds.

resultsWe identified a novel macrocyclic inhibitor of Plasmodium falciparum with nanomolar potency and identified the reduction site of cytochrome b as its cellular target. Combination experiments with reduction and oxidation site inhibitors showed synergistic inhibition of the parasite.

conclusionsThe cytochrome b oxidation center is a validated antimalarial target. We show that the reduction site of cytochrome b is also a druggable target. Our results demonstrating a synergistic relationship between oxidation and reduction site inhibitors suggests a future strategy for new combination therapies in the treatment of malaria.

Indexed as

AntimalarialsBase SequenceBenzenesulfonamidesCatalytic DomainCytochromes bDrug DiscoveryDrug ResistanceDrug SynergismEnzyme InhibitorsHigh-Throughput Nucleotide SequencingHigh-Throughput Screening AssaysHumansLactams, MacrocyclicMalaria, FalciparumMolecular Sequence DataOxidation-ReductionAntimalarialsBenzenesulfonamidesCytochromes bEnzyme InhibitorsLactams, MacrocyclicML238 compoundN-((11-(1-(dimethylamino)propan-2-yl)-14-(3-(3,5-dimethylisoxazol-4-yl)ureido)-2,9-dimethyl-12-oxo-2,3,4,5,6,8,9,10,11,12-decahydrobenzo(b)(1,9,5)dioxaazacyclotetradecin-8-yl)methyl)-4-fluoro-N-methylbenzenesulfonamidePhenylurea CompoundsProtozoan ProteinsSmall Molecule LibrariesUbiquinonecytochrome bdiversity-oriented synthesisdrug developmentdrug resistancemalariatarget identification

Identifiers

PMID25336726
PMCPMC4354981

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.