Evidence map›Paper›PMID 25336661›Full record

ArticleThe Journal of biological chemistry2014

Functionally important carboxyls in a bacterial homologue of the vesicular monoamine transporter (VMAT).

Dana Yaffe, Ariela Vergara-Jaque, Yonatan Shuster, Dina Listov, Sitaram Meena, Satinder K Singh, Lucy R Forrest, Shimon Schuldiner

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. The ins and outs of vesicular monoamine transporters.The Journal of general physiology · 2018
    Review
  8. Emulating proton-induced conformational changes in the vesicular monoamine transporter VMAT2 by mutagenesis.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Dana YaffeFrom the Department of Biological Chemistry, Alexander Silberman Institute of Life Sciences, Hebrew University, 91904 Jerusalem, Israel.
Ariela Vergara-Jaquethe Computational Structural Biology Section, NINDS, National Institutes of Health, Bethesda, Maryland 20852, and.
Yonatan ShusterFrom the Department of Biological Chemistry, Alexander Silberman Institute of Life Sciences, Hebrew University, 91904 Jerusalem, Israel.
Dina ListovFrom the Department of Biological Chemistry, Alexander Silberman Institute of Life Sciences, Hebrew University, 91904 Jerusalem, Israel.
Sitaram Meenathe Department of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut 06520.
Satinder K Singhthe Department of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut 06520.
Lucy R Forrestthe Computational Structural Biology Section, NINDS, National Institutes of Health, Bethesda, Maryland 20852, and.
Shimon SchuldinerFrom the Department of Biological Chemistry, Alexander Silberman Institute of Life Sciences, Hebrew University, 91904 Jerusalem, Israel, shimon.schuldiner@huji.ac.il.
Hebrew University of Jerusalem · ILNational Institutes of Health · USYale University · US

Funding

Computational Studies of Membrane Transport ProteinsZIANS003139 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI FORREST, LUCY · 2014 to 2025
$13.7M
MOLECULAR MECHANISM OF ACTIVE NEUROTRANSMITTER TRANSPORTR01NS016708 · NINDS · HEBREW UNIVERSITY OF JERUSALEM · PI KANNER, BARUCH I, SCHULDINER, SHIMON · 1985 to 2014
$3.0M
Structure and Function of a Serotonin TransporterR01MH100688 · NIMH · YALE UNIVERSITY · PI SINGH, SATINDER KAUR · 2014 to 2018
$2.9M
Transport and Inhibition in a Biogenic Amine TransporterR00MH083050 · NIMH · YALE UNIVERSITY · PI SINGH, SATINDER KAUR · 2010 to 2012
$736k
Structural Studies of Vesicular Monoamine TransportersR21MH098180 · NIMH · YALE UNIVERSITY · PI SINGH, SATINDER KAUR · 2012 to 2013
$432k
Mechanisms of Active Neurotransmitter TransportR56NS016708 · NINDS · HEBREW UNIVERSITY OF JERUSALEM · PI KANNER, BARUCH I, SCHULDINER, SHIMON · 2009 to 2009
$306k
Intramural NIH HHSNIMH NIH HHS R00 MH083050NIMH NIH HHS R01 MH100688NIMH NIH HHS R21 MH098180NIMH NIH HHS R21MH098180NINDS NIH HHS NS16708NINDS NIH HHS R01 NS016708NINDS NIH HHS R56 NS016708
6 · The paper itself

Abstract

Transporters essential for neurotransmission in mammalian organisms and bacterial multidrug transporters involved in antibiotic resistance are evolutionarily related. To understand in more detail the evolutionary aspects of the transformation of a bacterial multidrug transporter to a mammalian neurotransporter and to learn about mechanisms in a milieu amenable for structural and biochemical studies, we identified, cloned, and partially characterized bacterial homologues of the rat vesicular monoamine transporter (rVMAT2). We performed preliminary biochemical characterization of one of them, Brevibacillus brevis monoamine transporter (BbMAT), from the bacterium B. brevis. BbMAT shares substrates with rVMAT2 and transports them in exchange with >1H(+), like the mammalian transporter. Here we present a homology model of BbMAT that has the standard major facilitator superfamily fold; that is, with two domains of six transmembrane helices each, related by 2-fold pseudosymmetry whose axis runs normal to the membrane and between the two halves. The model predicts that four carboxyl residues, a histidine, and an arginine are located in the transmembrane segments. We show here that two of the carboxyls are conserved, equivalent to the corresponding ones in rVMAT2, and are essential for H(+)-coupled transport. We conclude that BbMAT provides an excellent experimental paradigm for the study of its mammalian counterparts and bacterial multidrug transporters.

Indexed as

Amino Acid SequenceAnimalsArginineBacterial ProteinsBiogenic MonoaminesBrevibacillusCarrier ProteinsDrug Resistance, BacterialEscherichia coliEvolution, MolecularGene ExpressionHistidineModels, MolecularMolecular Sequence DataProtein FoldingRatsArginineBacterial ProteinsBiogenic MonoaminesCarrier ProteinsHistidineRecombinant ProteinsSlc18a2 protein, ratVesicular Monoamine Transport ProteinsAntibiotic ResistanceMembrane TransportMultidrug TransporterNeurotransmitterNeurotransmitter TransportProton Transport

Identifiers

PMID25336661
PMCPMC4256354
OpenAlexW2069235280

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.