Evidence map›Paper›PMID 25336655›Full record

ArticleThe Journal of biological chemistry2014

A liquid chromatography-mass spectrometry-based approach to characterize the substrate specificity of mammalian heparanase.

Yang Mao, Yu Huang, Jo Ann Buczek-Thomas, Cheryl M Ethen, Matthew A Nugent, Zhengliang L Wu, Joseph Zaia

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

  1. Glycomics Meets Oncology: The Role of Mass Spectrometry in Cancer Research.Advances in experimental medicine and biology · 2026
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Non-Anticoagulant Heparins as Heparanase Inhibitors.Advances in experimental medicine and biology · 2020
    Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Emerging Roles of Heparanase in Viral Pathogenesis.Pathogens (Basel, Switzerland) · 2017
    Review
  17. Mast cell glycosaminoglycans.Glycoconjugate journal · 2017
    Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yang MaoFrom the Department of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118 and.
Yu HuangFrom the Department of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118 and.
Jo Ann Buczek-ThomasFrom the Department of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118 and.
Cheryl M EthenR&D Systems, Minneapolis, Minnesota 55413.
Matthew A NugentFrom the Department of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118 and.
Zhengliang L WuR&D Systems, Minneapolis, Minnesota 55413.
Joseph ZaiaFrom the Department of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118 and jzaia@bu.edu.
Boston University · USR&D Systems (United States) · US

Funding

Mass Spectrometry Resource for Biology and MedicineP41GM104603 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI COSTELLO, CATHERINE E. · 2012 to 2017
$10.4M
Post-biosynthetic Remodeling of Heparan SulfateR01HL098950 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ZAIA, JOSEPH · 2010 to 2013
$1.6M
Software for automated interpretation of heparan sulfate tandem mass spectraR21HL131554 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ZAIA, JOSEPH · 2015 to 2016
$761k
NHLBI NIH HHS R01 HL098950NHLBI NIH HHS R21 HL131554NIGMS NIH HHS P41 GM104603
6 · The paper itself

Abstract

Extracellular heparanase activity releases growth factors and angiogenic factors from heparan sulfate (HS) storage sites and alters the integrity of the extracellular matrix. These activities lead to a loss of normal cell matrix adherent junctions and correlate with invasive cellular phenotypes. Elevated expression of heparanase is associated with several human cancers and with vascular remodeling. Heparanase cleaves only a limited fraction of glucuronidic linkages in HS. There have been few investigations of the functional consequences of heparanase activity, largely due to the heterogeneity and complexity of HS. Here, we report a liquid chromatography-mass spectrometry (LC-MS)-based approach to profile the terminal structures created by heparanase digestion and reconstruct the heparanase cleavage sites from the products. Using this method, we demonstrate that heparanase cleaves at the non-reducing side of highly sulfated HS domains, exposing cryptic growth factor binding sites. This cleavage pattern is observed in HS from several tissue sources, regardless of overall sulfation degree, indicating a common recognition pattern. We further demonstrate that heparanase cleavage of HS chains leads to increased ability to support FGF2-dependent cell proliferation. These results suggest a new mechanism to explain how heparanase might potentiate the uncontrolled cell proliferation associated with cancer through its ability to activate nascent growth factor-promoting domains within HS.

Indexed as

AnimalsCarbohydrate SequenceCattleCell Line, TumorChromatography, LiquidExtracellular MatrixFibroblast Growth Factor 2Gene ExpressionGlucuronidaseHeparanaseHeparan SulfateHumansLymphocytesMolecular Sequence DataRecombinant ProteinsSubstrate SpecificityFibroblast Growth Factor 2GlucuronidaseHeparanaseHeparan SulfateRecombinant ProteinsSDC4 protein, humanSyndecan-4GlycosaminoglycanGlycosylationHeparanaseHeparan SulfateHeparinHeparin-binding Protein

Identifiers

PMID25336655
PMCPMC4256347
OpenAlexW2014245961

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.