Evidence map›Paper›PMID 25333968›Full record

ArticlePloS one2014

Neurospora crassa female development requires the PACC and other signal transduction pathways, transcription factors, chromatin remodeling, cell-to-cell fusion, and autophagy.

Jennifer L Chinnici, Ci Fu, Lauren M Caccamise, Jason W Arnold, Stephen J Free

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Mutations inJournal of fungi (Basel, Switzerland) · 2024
    Article
  4. Article
  5. Article
  6. Review
  7. Journal of fungi (Basel, Switzerland) · 2022
    Article
  8. Article
  9. Genetic Networks That Govern Sexual Reproduction in the Pezizomycotina.Microbiology and molecular biology reviews : MMBR · 2021
    Review
  10. Article
  11. Accessory Chromosomes inPhytopathology · 2020
    Review
  12. Article
  13. A WD40 Protein Encoding GeneFrontiers in microbiology · 2020
    Article
  14. Article
  15. The Blue-Light PhotoreceptorApplied and environmental microbiology · 2019
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jennifer L ChinniciDepartment of Biological Sciences, SUNY University at Buffalo, Buffalo, New York, United States of America.
Ci FuDepartment of Biological Sciences, SUNY University at Buffalo, Buffalo, New York, United States of America.
Lauren M CaccamiseDepartment of Biological Sciences, SUNY University at Buffalo, Buffalo, New York, United States of America.
Jason W ArnoldDepartment of Biological Sciences, SUNY University at Buffalo, Buffalo, New York, United States of America.
Stephen J FreeDepartment of Biological Sciences, SUNY University at Buffalo, Buffalo, New York, United States of America.
University at Buffalo, State University of New York · US

Funding

Tools for Functional Analysis and Cell BiologyP01GM068087 · NIGMS · DARTMOUTH COLLEGE · PI DUNLAP, JAY C. · 2004 to 2013
$19.3M
Characterization of Neurospora cell fusion eventsR01GM078589 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI FREE, STEPHEN J. · 2006 to 2010
$830k
NIGMS NIH HHS P01 GM068087NIGMS NIH HHS R01 GM078589
6 · The paper itself

Abstract

Using a screening protocol we have identified 68 genes that are required for female development in the filamentous fungus Neurospora crassa. We find that we can divide these genes into five general groups: 1) Genes encoding components of the PACC signal transduction pathway, 2) Other signal transduction pathway genes, including genes from the three N. crassa MAP kinase pathways, 3) Transcriptional factor genes, 4) Autophagy genes, and 5) Other miscellaneous genes. Complementation and RIP studies verified that these genes are needed for the formation of the female mating structure, the protoperithecium, and for the maturation of a fertilized protoperithecium into a perithecium. Perithecia grafting experiments demonstrate that the autophagy genes and the cell-to-cell fusion genes (the MAK-1 and MAK-2 pathway genes) are needed for the mobilization and movement of nutrients from an established vegetative hyphal network into the developing protoperithecium. Deletion mutants for the PACC pathway genes palA, palB, palC, palF, palH, and pacC were found to be defective in two aspects of female development. First, they were unable to initiate female development on synthetic crossing medium. However, they could form protoperithecia when grown on cellophane, on corn meal agar, or in response to the presence of nearby perithecia. Second, fertilized perithecia from PACC pathway mutants were unable to produce asci and complete female development. Protein localization experiments with a GFP-tagged PALA construct showed that PALA was localized in a peripheral punctate pattern, consistent with a signaling center associated with the ESCRT complex. The N. crassa PACC signal transduction pathway appears to be similar to the PacC/Rim101 pathway previously characterized in Aspergillus nidulans and Saccharomyces cerevisiae. In N. crassa the pathway plays a key role in regulating female development.

Indexed as

AutophagyCell CommunicationChromatin Assembly and DisassemblyFungal ProteinsGene Expression Regulation, FungalMutationNeurospora crassaSignal TransductionTranscription FactorsFungal ProteinsTranscription Factors

Identifiers

PMID25333968
PMCPMC4204872
OpenAlexW2070252134

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.