Evidence map›Paper›PMID 25333723›Full record

ArticlePloS one2014

AtRD22 and AtUSPL1, members of the plant-specific BURP domain family involved in Arabidopsis thaliana drought tolerance.

Vokkaliga Thammegowda Harshavardhan, Le Van Son, Christiane Seiler, Astrid Junker, Kathleen Weigelt-Fischer, Christian Klukas, Thomas Altmann, Nese Sreenivasulu, Helmut Bäumlein, Markus Kuhlmann

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
9.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 105 citations in OpenAlex.

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  11. Genome-Wide Analysis of BURP Domain-Containing Gene Family inInternational journal of molecular sciences · 2024
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  14. The Effect of External Treatment ofPlants (Basel, Switzerland) · 2024
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  15. Article
  16. Kiwifruit Resistance toInternational journal of molecular sciences · 2023
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  17. Genome-wide identification and expression analysis of the BURP domain-containing genes inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2023
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  20. A novelFrontiers in plant science · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 3 countries.

Vokkaliga Thammegowda HarshavardhanResearch Group Abiotic Stress Genomics, Interdisciplinary Center for Crop Plant Research (IZN), Halle (Saale), Germany, and Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, OT Gatersleben, Germany.
Le Van SonResearch Group Gene Regulation, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, OT Gatersleben, Germany; National Key Laboratory of Gene Technology, Institute of Biotechnology Vietnam, Academy of Science and Technology, Hanoi, Vietnam.
Christiane SeilerResearch Group Abiotic Stress Genomics, Interdisciplinary Center for Crop Plant Research (IZN), Halle (Saale), Germany, and Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, OT Gatersleben, Germany.
Astrid JunkerResearch Group Heterosis, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, OT Gatersleben, Germany.
Kathleen Weigelt-FischerResearch Group Heterosis, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, OT Gatersleben, Germany.
Christian KlukasResearch Group Image Analysis, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, OT Gatersleben, Germany.
Thomas AltmannResearch Group Heterosis, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, OT Gatersleben, Germany.
Nese SreenivasuluResearch Group Abiotic Stress Genomics, Interdisciplinary Center for Crop Plant Research (IZN), Halle (Saale), Germany, and Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, OT Gatersleben, Germany; Grain Quality and Nutrition Center, International Rice Research Institute (IRRI), Metro Manila, Philippines.
Helmut BäumleinResearch Group Gene Regulation, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, OT Gatersleben, Germany.
Markus KuhlmannResearch Group Abiotic Stress Genomics, Interdisciplinary Center for Crop Plant Research (IZN), Halle (Saale), Germany, and Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, OT Gatersleben, Germany.
Leibniz Institute of Plant Genetics and Crop Plant Research · DEVietnam Academy of Science and Technology · VN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Crop plants are regularly challenged by a range of environmental stresses which typically retard their growth and ultimately compromise economic yield. The stress response involves the reprogramming of approximately 4% of the transcriptome. Here, the behavior of AtRD22 and AtUSPL1, both members of the Arabidopsis thaliana BURP (BNM2, USP, RD22 and polygalacturonase isozyme) domain-containing gene family, has been characterized. Both genes are up-regulated as part of the abscisic acid (ABA) mediated moisture stress response. While AtRD22 transcript was largely restricted to the leaf, that of AtUSPL1 was more prevalent in the root. As the loss of function of either gene increased the plant's moisture stress tolerance, the implication was that their products act to suppress the drought stress response. In addition to the known involvement of AtUSPL1 in seed development, a further role in stress tolerance was demonstrated. Based on transcriptomic data and phenotype we concluded that the enhanced moisture stress tolerance of the two loss-of-function mutants is a consequence of an enhanced basal defense response.

Indexed as

DroughtsMultigene FamilyProtein Interaction Domains and MotifsAdaptation, BiologicalArabidopsisArabidopsis ProteinsChlorophyllGene DeletionGene Expression ProfilingGene Expression Regulation, PlantGene OrderMutagenesis, InsertionalOsmotic PressurePhenotypePheophytinsPlants, Genetically ModifiedArabidopsis ProteinsChlorophyllPheophytinsRD22 protein, Arabidopsis

Identifiers

PMID25333723
PMCPMC4198191
OpenAlexW2111487839

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.