Evidence map›Paper›PMID 25333461›Full record

ArticleThe ISME journal2015

Broad host range plasmids can invade an unexpectedly diverse fraction of a soil bacterial community.

Uli Klümper, Leise Riber, Arnaud Dechesne, Analia Sannazzarro, Lars H Hansen, Søren J Sørensen, Barth F Smets

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 186 papers.

0numbers the graph read from it
0cells of the map it votes in
186citing papers in PubMed
12.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

186 citing papers in PubMed, 458 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. A Seven-Year Study of Carbapenem-ResistantAntibiotics (Basel, Switzerland) · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

126 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Uli KlümperDepartment of Environmental Engineering, Technical University of Denmark, Kgs. Lyngby, Denmark.
Leise RiberSection for Microbiology, Department of Biology, University of Copenhagen, Copenhagen, Denmark.
Arnaud DechesneDepartment of Environmental Engineering, Technical University of Denmark, Kgs. Lyngby, Denmark.
Analia SannazzarroSection for Microbiology, Department of Biology, University of Copenhagen, Copenhagen, Denmark.
Lars H Hansen1] Section for Microbiology, Department of Biology, University of Copenhagen, Copenhagen, Denmark [2] Department of Environmental Science, Aarhus University, Roskilde, Denmark.
Søren J SørensenSection for Microbiology, Department of Biology, University of Copenhagen, Copenhagen, Denmark.
Barth F SmetsDepartment of Environmental Engineering, Technical University of Denmark, Kgs. Lyngby, Denmark.
Technical University of Denmark · DKUniversity of Copenhagen · DKAarhus University · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Conjugal plasmids can provide microbes with full complements of new genes and constitute potent vehicles for horizontal gene transfer. Conjugal plasmid transfer is deemed responsible for the rapid spread of antibiotic resistance among microbes. While broad host range plasmids are known to transfer to diverse hosts in pure culture, the extent of their ability to transfer in the complex bacterial communities present in most habitats has not been comprehensively studied. Here, we isolated and characterized transconjugants with a degree of sensitivity not previously realized to investigate the transfer range of IncP- and IncPromA-type broad host range plasmids from three proteobacterial donors to a soil bacterial community. We identified transfer to many different recipients belonging to 11 different bacterial phyla. The prevalence of transconjugants belonging to diverse Gram-positive Firmicutes and Actinobacteria suggests that inter-Gram plasmid transfer of IncP-1 and IncPromA-type plasmids is a frequent phenomenon. While the plasmid receiving fractions of the community were both plasmid- and donor- dependent, we identified a core super-permissive fraction that could take up different plasmids from diverse donor strains. This fraction, comprising 80% of the identified transconjugants, thus has the potential to dominate IncP- and IncPromA-type plasmid transfer in soil. Our results demonstrate that these broad host range plasmids have a hitherto unrecognized potential to transfer readily to very diverse bacteria and can, therefore, directly connect large proportions of the soil bacterial gene pool. This finding reinforces the evolutionary and medical significances of these plasmids.

Indexed as

Gene Transfer, HorizontalSoil MicrobiologyActinobacteriaBacteriaConjugation, GeneticGenes, BacterialHost SpecificityPlasmidsProteobacteria

Identifiers

PMID25333461
PMCPMC4817699
OpenAlexW2085558835

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.