Evidence map›Paper›PMID 25333283›Full record

ArticlePloS one2014

Effects of oxidized phospholipids on gene expression in RAW 264.7 macrophages: a microarray study.

Daniel Koller, Hubert Hackl, Juliane Gertrude Bogner-Strauß, Albin Hermetter

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Daniel KollerInstitute of Biochemistry, Graz University of Technology, Graz, Austria.
Hubert HacklBiocenter, Division of Bioinformatics, Innsbruck Medical University, Innsbruck, Austria.
Juliane Gertrude Bogner-StraußInstitute of Biochemistry, Graz University of Technology, Graz, Austria.
Albin HermetterInstitute of Biochemistry, Graz University of Technology, Graz, Austria.
Graz University of Technology · ATInnsbruck Medical University · AT

Funding

Austrian Science Fund FWF P 24143
6 · The paper itself

Abstract

Oxidized phospholipids (oxPLs) are components of oxidized LDL (oxLDL). It is known that oxLDL activates expression of a series of atherogenic genes and their oxPLs contribute to their biological activities. In this study we present the effects of 1-palmitoyl-2-glutaroyl-sn-glycero-3-phosphocholine (PGPC) and 1-palmitoyl-2-(5-oxovaleroyl)-sn-glycero-3-phosphocholine (POVPC) on gene expression in RAW 264.7 macrophages using cDNA microarrays. PGPC affected the regulation of 146 genes, whereas POVPC showed only very minor effects. PGPC preferentially influenced expression of genes related to cell death, angiogenesis, cholesterol efflux, procoagulant mechanisms, atherogenesis, inflammation, and cell cycle. Many of these effects are known from studies with oxLDL or oxidized 1-hexadecanoyl-2-eicosatetra-5',8',11',14'-enoyl-sn-glycero-3-phosphocholine (oxPAPC), containing PGPC in addition to other oxPL species. It is known that POVPC efficiently reacts with proteins by Schiff base formation, whereas PGPC only physically interacts with its biological targets. POVPC seems to affect cell physiology to a great extent on the protein level, whereas PGPC gives rise to both the modulation of protein function and regulation on the transcriptional level.

Indexed as

Oligonucleotide Array Sequence AnalysisAnimalsApoptosisCell Cycle CheckpointsCell LineCholesterolDown-RegulationMacrophagesMiceNeovascularization, PhysiologicPhospholipid EthersSchiff BasesTime FactorsUp-Regulation1-palmitoyl-2-(5-oxovaleroyl)-sn-glycero-3-phosphorylcholine1-palmitoyl-2-glutaroyl-sn-glycero-3-phosphorylcholineCholesterolPhospholipid EthersSchiff Bases

Identifiers

PMID25333283
PMCPMC4204898
OpenAlexW2007836341

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.