Evidence map›Paper›PMID 25333276›Full record

ArticlePloS one2014

The α1,6-fucosyltransferase gene (fut8) from the Sf9 lepidopteran insect cell line: insights into fut8 evolution.

Sylvie Juliant, Anne Harduin-Lepers, François Monjaret, Béatrice Catieau, Marie-Luce Violet, Pierre Cérutti, Annick Ozil, Martine Duonor-Cérutti

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. The underestimated N-glycomes of lepidopteran species.Biochimica et biophysica acta. General subjects · 2017
    Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Sylvie JuliantCNRS UPS3044 Baculovirus et Thérapie, Saint Christol Lèz Alès, France.
Anne Harduin-LepersCNRS UMR8576, Unité de Glycobiologie Structurale et Fonctionnelle, Université Lille Nord de France, Lille1, Villeneuve d'Ascq, France.
François MonjaretCNRS UPS3044 Baculovirus et Thérapie, Saint Christol Lèz Alès, France.
Béatrice CatieauCNRS UMR8576, Unité de Glycobiologie Structurale et Fonctionnelle, Université Lille Nord de France, Lille1, Villeneuve d'Ascq, France; Laboratoire Français du Fractionnement et des Biotechnologies de Lille, Lille, France.
Marie-Luce VioletCNRS UPS3044 Baculovirus et Thérapie, Saint Christol Lèz Alès, France.
Pierre CéruttiCNRS UPS3044 Baculovirus et Thérapie, Saint Christol Lèz Alès, France.
Annick OzilCNRS UPS3044 Baculovirus et Thérapie, Saint Christol Lèz Alès, France.
Martine Duonor-CéruttiCNRS UPS3044 Baculovirus et Thérapie, Saint Christol Lèz Alès, France.
Centre National de la Recherche Scientifique · FRLFB (France) · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The core alpha1,6-fucosyltransferase (FUT8) catalyzes the transfer of a fucosyl moiety from GDP-fucose to the innermost asparagine-linked N-acetylglucosamine residue of glycoproteins. In mammals, this glycosylation has an important function in many fundamental biological processes and although no essential role has been demonstrated yet in all animals, FUT8 amino acid (aa) sequence and FUT8 activity are very well conserved throughout the animal kingdom. We have cloned the cDNA and the complete gene encoding the FUT8 in the Sf9 (Spodoptera frugiperda) lepidopteran cell line. As in most animal genomes, fut8 is a single-copy gene organized in different exons. The open reading frame contains 12 exons, a characteristic that seems to be shared by all lepidopteran fut8 genes. We chose to study the gene structure as a way to characterize the evolutionary relationships of the fut8 genes in metazoans. Analysis of the intron-exon organization in 56 fut8 orthologs allowed us to propose a model for fut8 evolution in metazoans. The presence of a highly variable number of exons in metazoan fut8 genes suggests a complex evolutionary history with many intron gain and loss events, particularly in arthropods, but not in chordata. Moreover, despite the high conservation of lepidoptera FUT8 sequences also in vertebrates and hymenoptera, the exon-intron organization of hymenoptera fut8 genes is order-specific with no shared exons. This feature suggests that the observed intron losses and gains may be linked to evolutionary innovations, such as the appearance of new orders.

Indexed as

Biological EvolutionAnimalsBase SequenceCloning, MolecularExonsFucosyltransferasesGenomeInsectaInsect ProteinsMolecular Sequence DataOpen Reading FramesPhylogenyRecombinant ProteinsSf9 CellsSpodopteraFucosyltransferasesInsect ProteinsRecombinant Proteins

Identifiers

PMID25333276
PMCPMC4204859
OpenAlexW2037942529

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.