Evidence map›Paper›PMID 25333256›Full record

ArticleOncotarget2014

TRIM16 inhibits proliferation and migration through regulation of interferon beta 1 in melanoma cells.

Selina K Sutton, Jessica Koach, Owen Tan, Bing Liu, Daniel R Carter, James S Wilmott, Benafsha Yosufi, Lauren E Haydu, Graham J Mann, John F Thompson and 7 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

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  12. TRIM proteins in neuroblastoma.Bioscience reports · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 1 country.

Selina K SuttonChildren's Cancer Institute, Lowy Cancer Research Centre, UNSW Australia, Sydney, Australia.
Jessica KoachChildren's Cancer Institute, Lowy Cancer Research Centre, UNSW Australia, Sydney, Australia.
Owen TanChildren's Cancer Institute, Lowy Cancer Research Centre, UNSW Australia, Sydney, Australia.
Bing LiuChildren's Cancer Institute, Lowy Cancer Research Centre, UNSW Australia, Sydney, Australia.
Daniel R CarterChildren's Cancer Institute, Lowy Cancer Research Centre, UNSW Australia, Sydney, Australia.
James S WilmottMelanoma Institute Australia and the University of Sydney, Sydney Australia.
Benafsha YosufiMelanoma Institute Australia and the University of Sydney, Sydney Australia. Tissue Pathology and Diagnostic Oncology, Royal Prince Alfred Hospital, Sydney and Discipline of Pathology, Sydney Medical School, The University of Sydney, Australia.
Lauren E HayduTissue Pathology and Diagnostic Oncology, Royal Prince Alfred Hospital, Sydney and Discipline of Pathology, Sydney Medical School, The University of Sydney, Australia.
Graham J MannMelanoma Institute Australia and the University of Sydney, Sydney Australia. Tissue Pathology and Diagnostic Oncology, Royal Prince Alfred Hospital, Sydney and Discipline of Pathology, Sydney Medical School, The University of Sydney, Australia.
John F ThompsonTissue Pathology and Diagnostic Oncology, Royal Prince Alfred Hospital, Sydney and Discipline of Pathology, Sydney Medical School, The University of Sydney, Australia.
Georgina V LongMelanoma Institute Australia and the University of Sydney, Sydney Australia.
Tao LiuChildren's Cancer Institute, Lowy Cancer Research Centre, UNSW Australia, Sydney, Australia.
Grant McArthurMolecular Oncology Laboratory, Oncogenic Signaling and Growth Control Program, Peter MacCallum Cancer Centre, East Melbourne, VIC 3002, Australia. Sir Peter MacCallum Department of Oncology, The University of Melbourne, Parkville, VIC 3010, Australia.
Xu Dong ZhangPriority Research Centre for Cancer Research, Oncology and Immunology Unit, University of Newcastle, NSW, Australia.
Richard A ScolyerMelanoma Institute Australia and the University of Sydney, Sydney Australia. Tissue Pathology and Diagnostic Oncology, Royal Prince Alfred Hospital, Sydney and Discipline of Pathology, Sydney Medical School, The University of Sydney, Australia.
Belamy B CheungChildren's Cancer Institute, Lowy Cancer Research Centre, UNSW Australia, Sydney, Australia.
Glenn M MarshallChildren's Cancer Institute, Lowy Cancer Research Centre, UNSW Australia, Sydney, Australia. Kids Cancer Centre, Sydney Children's Hospital, Sydney, Australia.
Royal Prince Alfred Hospital · AUMelanoma Institute Australia · AUUniversity of Sydney · AUSydney Children's Hospital · AUUniversity of Melbourne · AUUniversity of Newcastle Australia · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High basal or induced expression of the tripartite motif protein, TRIM16, leads to reduce cell growth and migration of neuroblastoma and skin squamous cell carcinoma cells. However, the role of TRIM16 in melanoma is currently unknown. TRIM16 protein levels were markedly reduced in human melanoma cell lines, compared with normal human epidermal melanocytes due to both DNA methylation and reduced protein stability. TRIM16 knockdown strongly increased cell migration in normal human epidermal melanocytes, while TRIM16 overexpression reduced cell migration and proliferation of melanoma cells in an interferon beta 1 (IFNβ1)-dependent manner. Chromatin immunoprecipitation assays revealed TRIM16 directly bound the IFNβ1 gene promoter. Low level TRIM16 expression in 91 melanoma patient samples, strongly correlated with lymph node metastasis, and, predicted poor patient prognosis in a separate cohort of 170 melanoma patients with lymph node metastasis. The BRAF inhibitor, vemurafenib, increased TRIM16 protein levels in melanoma cells in vitro, and induced growth arrest in BRAF-mutant melanoma cells in a TRIM16-dependent manner. High levels of TRIM16 in melanoma tissues from patients treated with Vemurafenib correlated with clinical response. Our data, for the first time, demonstrates TRIM16 is a marker of cell migration and metastasis, and a novel treatment target in melanoma.

Indexed as

Cell Line, TumorCell MovementCell ProliferationDNA-Binding ProteinsHumansIndolesInterferon-betaMelanomaPromoter Regions, GeneticSkin NeoplasmsSulfonamidesTranscription FactorsTransfectionTripartite Motif ProteinsUbiquitin-Protein LigasesVemurafenibDNA-Binding ProteinsIndolesInterferon-betaSulfonamidesTranscription FactorsTRIM16 protein, humanTripartite Motif ProteinsUbiquitin-Protein LigasesVemurafenib

Identifiers

PMID25333256
PMCPMC4259410
OpenAlexW1579348814

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.