Evidence map›Paper›PMID 25331899›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Cog5-Cog7 crystal structure reveals interactions essential for the function of a multisubunit tethering complex.

Jun Yong Ha, Irina D Pokrovskaya, Leslie K Climer, Gregory R Shimamura, Tetyana Kudlyk, Philip D Jeffrey, Vladimir V Lupashin, Frederick M Hughson

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Golgi inCOGnito: From vesicle tethering to human disease.Biochimica et biophysica acta. General subjects · 2020
    Review
  8. Article
  9. Conserved Oligomeric Golgi and Neuronal Vesicular Trafficking.Handbook of experimental pharmacology · 2018
    Review
  10. Molecular architecture of the complete COG tethering complex.Nature structural & molecular biology · 2016
    Article
  11. Article
  12. Article
  13. Article
  14. Bridging the Gap between Glycosylation and Vesicle Traffic.Frontiers in cell and developmental biology · 2016
    Review
  15. Article
  16. Tethering Complexes in the Arabidopsis Endomembrane System.Frontiers in cell and developmental biology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jun Yong HaDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544;
Irina D PokrovskayaDepartment of Physiology and Biophysics, University of Arkansas for Medical Sciences, Little Rock, AR 72205; and.
Leslie K ClimerDepartment of Physiology and Biophysics, University of Arkansas for Medical Sciences, Little Rock, AR 72205; and.
Gregory R ShimamuraDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544;
Tetyana KudlykDepartment of Physiology and Biophysics, University of Arkansas for Medical Sciences, Little Rock, AR 72205; and.
Philip D JeffreyDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544;
Vladimir V LupashinDepartment of Physiology and Biophysics, University of Arkansas for Medical Sciences, Little Rock, AR 72205; and Biological Institute, Tomsk State University, Tomsk, 634050, Russian Federation.
Frederick M HughsonDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544; hughson@princeton.edu.
Princeton University · USUniversity of Arkansas for Medical Sciences · USNational Research Tomsk State University · RU

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007388 · NIGMS · PRINCETON UNIVERSITY · PI CRISTEA, ILEANA M. · 1985 to 2022
$27.4M
Life Science and Biomedical technology Research center at NSLS-II LSBRP41GM111244 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI MCSWEENEY, SEAN · 2014 to 2018
$16.4M
Structural Analysis of Membrane Tethering and Fusion ProteinsR01GM071574 · NIGMS · PRINCETON UNIVERSITY · PI HUGHSON, FREDERICK M · 2005 to 2024
$6.8M
Characterization of mammalian COG complex-interacting intra-Golgi trafficking macR01GM083144 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI VLADIMIR V LUPASHIN · 2008 to 2026
$6.5M
NIGMS NIH HHS P41 GM111244NIGMS NIH HHS R01 GM071574NIGMS NIH HHS R01 GM083144NIGMS NIH HHS T32 GM007388
6 · The paper itself

Abstract

The conserved oligomeric Golgi (COG) complex is required, along with SNARE and Sec1/Munc18 (SM) proteins, for vesicle docking and fusion at the Golgi. COG, like other multisubunit tethering complexes (MTCs), is thought to function as a scaffold and/or chaperone to direct the assembly of productive SNARE complexes at the sites of membrane fusion. Reflecting this essential role, mutations in the COG complex can cause congenital disorders of glycosylation. A deeper understanding of COG function and dysfunction will likely depend on elucidating its molecular structure. Despite some progress toward this goal, including EM studies of COG lobe A (subunits 1-4) and higher-resolution structures of portions of Cog2 and Cog4, the structures of COG's eight subunits and the principles governing their assembly are mostly unknown. Here, we report the crystal structure of a complex between two lobe B subunits, Cog5 and Cog7. The structure reveals that Cog5 is a member of the complexes associated with tethering containing helical rods (CATCHR) fold family, with homology to subunits of other MTCs including the Dsl1, exocyst, and Golgi-associated retrograde protein (GARP) complexes. The Cog5-Cog7 interaction is analyzed in relation to the Dsl1 complex, the only other CATCHR-family MTC for which subunit interactions have been characterized in detail. Biochemical and functional studies validate the physiological relevance of the observed Cog5-Cog7 interface, indicate that it is conserved from yeast to humans, and demonstrate that its disruption in human cells causes defects in trafficking and glycosylation.

Indexed as

Adaptor Proteins, Vesicular TransportCrystallography, X-RayHumansMultiprotein ComplexesProtein Structure, QuaternaryProtein Structure, SecondaryAdaptor Proteins, Vesicular TransportCOG5 protein, humanCOG7 protein, humanMultiprotein ComplexesCATCHRCOG complexcongenital glycosylation disorderGolgivesicle fusion

Identifiers

PMID25331899
PMCPMC4226102
OpenAlexW2081273740

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.