Evidence map›Paper›PMID 25331695›Full record

ArticleAntimicrobial agents and chemotherapy2015

Activity spectrum of colicins produced by Shigella sonnei and genetic mechanism of colicin resistance in conspecific S. sonnei strains and Escherichia coli.

Fatema Calcuttawala, Chellaram Hariharan, Gururaja P Pazhani, Santanu Ghosh, Thandavarayan Ramamurthy

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. Microbiology (Reading, England) · 2024
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Shigella sonnei Does Not Use Amoebae as Protective Hosts.Applied and environmental microbiology · 2018
    Article
  13. Review
  14. Shigella Diversity and Changing Landscape: Insights for the Twenty-First Century.Frontiers in cellular and infection microbiology · 2016
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Fatema CalcuttawalaDivision of Bacteriology, National Institute of Cholera and Enteric Diseases, Kolkata, India.
Chellaram HariharanDivision of Bacteriology, National Institute of Cholera and Enteric Diseases, Kolkata, India.
Gururaja P PazhaniDivision of Bacteriology, National Institute of Cholera and Enteric Diseases, Kolkata, India.
Santanu GhoshDivision of Bacteriology, National Institute of Cholera and Enteric Diseases, Kolkata, India.
Thandavarayan RamamurthyDivision of Bacteriology, National Institute of Cholera and Enteric Diseases, Kolkata, India tramu@vsnl.net.
National Institute of Cholera and Enteric Diseases · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colicin-mediated killing is an example of allelopathy, which has been found among several bacteria. Screening of 42 strains of Shigella sonnei isolated from diarrheal patients revealed that 39 (93%) S. sonnei strains were positive for colicin production against Escherichia coli DH5α. In the PCR-based detection of the colicin types, 36 (92.3%) were identified as E3, 2 (5.1%) as E3 and E8, and 1 (2.6%) as E3 and E2. Representative S. sonnei strains producing heterologous colicins exhibited antagonism against diarrheagenic Escherichia coli (DEC) groups. Although it is known that mutation in the colicin receptor renders the host resistant to colicin, there is a dearth of information on the genetic characterization of such mutants. In the fluctuation test, colicin-resistant E. coli mutants were found to occur spontaneously at the rates of 2.51 × 10(-8) and 5.52 × 10(-8) per generation when exposed to colicins E3 and E8 and colicins E3 and E2, respectively. Genotypic characterization of colicin-resistant E. coli (EC(Cr)) and S. sonnei (SS(Cr)) strains displayed mutations in the btuB gene, which encodes the receptor for vitamin B12 uptake. This gene was interrupted by various insertion sequences, such as IS1, IS2, and IS911. Complementation of EC(Cr) and SS(Cr) with plasmid-borne btuB (pbtuB) accomplished restoration of the colicin-susceptible phenotype. The vitamin B12 uptake assay gave an insight into the physiological relevance of the btuB mutation. Our studies provide insights into the latent influence of S. sonnei colicins in governing the existence of some of the shigellae and all of the DEC and the genetic mechanism underlying the emergence of resistance.

Indexed as

AllelopathyAnti-Bacterial AgentsBacterial Outer Membrane ProteinsBase SequenceBiological TransportColicinsDNA Transposable ElementsDrug Resistance, BacterialEscherichia coliEscherichia coli ProteinsFecesHumansMembrane Transport ProteinsMicrobial Sensitivity TestsMolecular Sequence DataSequence Analysis, DNAAnti-Bacterial AgentsBacterial Outer Membrane ProteinsBtuB protein, E coliColicinsDNA Transposable ElementsEscherichia coli ProteinsMembrane Transport ProteinsVitamin B 12

Identifiers

PMID25331695
PMCPMC4291344
OpenAlexW2109963047

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.