Evidence map›Paper›PMID 25330987›Full record

ArticleStem cells (Dayton, Ohio)2015

A thyroid hormone receptor/KLF9 axis in human hepatocytes and pluripotent stem cells.

Aleksandra Cvoro, Liani Devito, Flora A Milton, Laila Noli, Aijun Zhang, Celine Filippi, Keiko Sakai, Ji Ho Suh, Douglas H Sieglaff, Anil Dhawan and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Stem cells (Dayton, Ohio), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Dioxin Disrupts Thyroid Hormone and Glucocorticoid Induction of klf9, a Master Regulator of Frog Metamorphosis.Toxicological sciences : an official journal of the Society of Toxicology · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Aleksandra CvoroGenomic Medicine, Houston Methodist Research Institute, Houston, Texas, USA.
Liani Devito
Flora A Milton
Laila Noli
Aijun Zhang
Celine Filippi
Keiko Sakai
Ji Ho Suh
Douglas H Sieglaff
Anil Dhawan
Takao Sakai
Dusko Ilic
Paul Webb
Houston Methodist · USKing's College London · GBUniversity of Liverpool · GBGuy's and St Thomas' NHS Foundation Trust · GB

Funding

Structures of Protein Complexes Regulating Transcription in Enbryonic Stem CellsU01GM094614 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WEBB, PAUL · 2010 to 2014
$5.7M
Optimal Selective Thyroid Hormone Analogs for Metabolic SyndromeRC4DK090849 · NIDDK · METHODIST HOSPITAL RESEARCH INSTITUTE · PI WEBB, PAUL · 2010 to 2010
$2.9M
Medical Research Council G0801061NIDDK NIH HHS RC4 DK090849NIGMS NIH HHS U01 GM094614NIGMS NIH HHS UO1 GM094614
6 · The paper itself

Abstract

Biological processes require close cooperation of multiple transcription factors that integrate different signals. Thyroid hormone receptors (TRs) induce Krüppel-like factor 9 (KLF9) to regulate neurogenesis. Here, we show that triiodothyronine (T3) also works through TR to induce KLF9 in HepG2 liver cells, mouse liver, and mouse and human primary hepatocytes and sought to understand TR/KLF9 network function in the hepatocyte lineage and stem cells. Knockdown experiments reveal that KLF9 regulates hundreds of HepG2 target genes and modulates T3 response. Together, T3 and KLF9 target genes influence pathways implicated in stem cell self-renewal and differentiation, including Notch signaling, and we verify that T3 and KLF9 cooperate to regulate key Notch pathway genes and work independently to regulate others. T3 also induces KLF9 in human embryonic stem cells (hESCs) and human induced pluripotent stem cells (hiPSC) and this effect persists during differentiation to definitive endoderm and hiPSC-derived hepatocytes. Microarray analysis reveals that T3 regulates hundreds of hESC and hiPSC target genes that cluster into many of the same pathways implicated in TR and KLF9 regulation in HepG2 cells. KLF9 knockdown confirms that TR and KLF9 cooperate to regulate Notch pathway genes in hESC and hiPSC, albeit in a partly cell-specific manner. Broader analysis of T3 responsive hESC/hiPSC genes suggests that TRs regulate multiple early steps in ESC differentiation. We propose that TRs cooperate with KLF9 to regulate hepatocyte proliferation and differentiation and early stages of organogenesis and that TRs exert widespread and important influences on ESC biology.

Indexed as

AnimalsCell DifferentiationFemaleHepatocytesHep G2 CellsHumansKruppel-Like Transcription FactorsMaleMicePluripotent Stem CellsReceptors, NotchReceptors, Thyroid HormoneSignal TransductionTriiodothyronineKLF9 protein, humanKlf9 protein, mouseKruppel-Like Transcription FactorsReceptors, NotchReceptors, Thyroid HormoneTriiodothyronineHuman embryonic stem cellInduced pluripotent stem cellKrüppel-like factor 9NotchThyroid receptor

Identifiers

PMID25330987
PMCPMC6317531
OpenAlexW1911990264

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.