Evidence map›Paper›PMID 25328122›Full record

ArticleMolecular carcinogenesis2015

Elevated expression of long intergenic non-coding RNA HOTAIR in a basal-like variant of MCF-7 breast cancer cells.

Yan Zhuang, Hong T Nguyen, Matthew E Burow, Ying Zhuo, Samir S El-Dahr, Xiao Yao, Subing Cao, Erik K Flemington, Kenneth P Nephew, Fang Fang and 5 more

Abstract read
In one paragraph

Article in Molecular carcinogenesis, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 35 citations in OpenAlex.

  1. Breast Cancer Chemoresistance: Insights into the Regulatory Role of lncRNA.International journal of molecular sciences · 2023
    Review
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  7. Review
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  9. Article
  10. Long Non-Coding RNACancers · 2020
    Review
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  13. Article
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  15. Article
  16. Article
  17. Role of long non-coding RNA in tumor drug resistance.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Yan ZhuangDepartment of Medicine, Tulane University School of Medicine, New Orleans, Louisiana.
Hong T NguyenDepartment of Medicine, Tulane University School of Medicine, New Orleans, Louisiana.
Matthew E BurowDepartment of Medicine, Tulane University School of Medicine, New Orleans, Louisiana.
Ying ZhuoKadlec Regional Medical Center, Richland, Washington.
Samir S El-DahrDepartment of Pediatrics, Tulane University School of Medicine, New Orleans, Louisiana.
Xiao YaoKadlec Regional Medical Center, Richland, Washington.
Subing CaoDepartment of Pathology, Tulane University School of Medicine, New Orleans, Louisiana.
Erik K FlemingtonDepartment of Pathology, Tulane University School of Medicine, New Orleans, Louisiana.
Kenneth P NephewDepartment of Medical Sciences, Indiana University School of Medicine, Bloomington, Indiana.
Fang FangDepartment of Medical Sciences, Indiana University School of Medicine, Bloomington, Indiana.
Bridgette Collins-BurowDepartment of Medicine, Tulane University School of Medicine, New Orleans, Louisiana.
Lyndsay V RhodesDepartment of Medicine, Tulane University School of Medicine, New Orleans, Louisiana.
Qiang YuGenome Institute of Singapore, Singapore, Singapore.
Janarthanan JayawickramarajahDepartment of Chemistry, Tulane University, New Orleans, Louisiana.
Bin ShanWashington State University at Spokane, Spokane, Washington.
Tulane University · USIndiana University Bloomington · USKadlec Regional Medical Center · USGenome Institute of Singapore · SGWashington State University Spokane · US

Funding

Translational Research in Hypertension and Renal BiologyP30GM103337 · NIGMS · TULANE UNIVERSITY OF LOUISIANA · PI NAVAR, LUIS GABRIEL · 2012 to 2016
$5.8M
Epstein Barr virus antisense transcriptionR01AI106676 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI FLEMINGTON, ERIK K · 2014 to 2018
$1.9M
MEK5-Erk5 in breast cancer resistanceR01CA125806 · NCI · TULANE UNIVERSITY OF LOUISIANA · PI BUROW, MATTHEW E. · 2010 to 2014
$1.5M
Supramolecular Approaches to Protein Inhibitors Activated by MicroRNA-21R01GM097571 · NIGMS · TULANE UNIVERSITY OF LOUISIANA · PI JAYAWICKRAMARAJAH, JANARTHANAN · 2012 to 2016
$1.4M
NCI NIH HHS R01 CA125806NIAID NIH HHS R01 AI106676NIGMS NIH HHS P30 GM103337NIGMS NIH HHS R01 GM097571NIGMS NIH HHS R01GM097571
6 · The paper itself

Abstract

Epigenetic regulation of gene expression is critical to phenotypic maintenance and transition of human breast cancer cells. HOX antisense intergenic RNA (HOTAIR) is a long intergenic non-coding RNA that epigenetically represses gene expression via recruitment of enhancer of zeste homolog 2 (EZH2), a histone methyltransferase. Elevated expression of HOTAIR promotes progression of breast cancer. In the current study we examined the expression and function of HOTAIR in MCF-7-TNR cells, a derivative of the luminal-like breast cancer cell line MCF-7 that acquired resistance to TNF-α-induced cell death. The expression of HOTAIR, markers of the luminal-like and basal-like subtypes, and growth were compared between MCF-7 and MCF-7-TNR cells. These variables were further assessed upon inhibition of HOTAIR, EZH2, p38 MAPK, and SRC kinase in MCF-7-TNR cells. When compared with MCF-7 cells, MCF-7-TNR cells exhibited an increase in the expression of HOTAIR, which correlated with characteristics of a luminal-like to basal-like transition as evidenced by dysregulated gene expression and accelerated growth. MCF-7-TNR cells exhibited reduced suppressive histone H3 lysine27 trimethylation on the HOTAIR promoter. Inhibition of HOTAIR and EZH2 attenuated the luminal-like to basal-like transition in terms of gene expression and growth in MCF-7-TNR cells. Inhibition of p38 and SRC diminished HOTAIR expression and the basal-like phenotype in MCF-7-TNR cells. HOTAIR was robustly expressed in the native basal-like breast cancer cells and inhibition of HOTAIR reduced the basal-like gene expression and growth. Our findings suggest HOTAIR-mediated regulation of gene expression and growth associated with the basal-like phenotype of breast cancer cells.

Indexed as

Breast NeoplasmsCell Line, TumorEnhancer of Zeste Homolog 2 ProteinEpigenesis, GeneticFemaleGene Expression Regulation, NeoplasticHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesHumansMCF-7 Cellsp38 Mitogen-Activated Protein KinasesPolycomb Repressive Complex 2RNA, Long Noncodingsrc-Family KinasesTumor Necrosis Factor-alphaEnhancer of Zeste Homolog 2 ProteinEZH2 protein, humanHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesHOTAIR long untranslated RNA, humanp38 Mitogen-Activated Protein KinasesPolycomb Repressive Complex 2RNA, Long Noncodingsrc-Family KinasesTumor Necrosis Factor-alphabreast cancerEZH2HOTAIRlincRNA

Identifiers

PMID25328122
PMCPMC4402121
OpenAlexW1496926187

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.