Evidence map›Paper›PMID 25326916›Full record

ArticleJournal of experimental botany2015

A reversible Renilla luciferase protein complementation assay for rapid identification of protein-protein interactions reveals the existence of an interaction network involved in xyloglucan biosynthesis in the plant Golgi apparatus.

Christian H Lund, Jennifer R Bromley, Anne Stenbæk, Randi E Rasmussen, Henrik V Scheller, Yumiko Sakuragi

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 39 citations in OpenAlex.

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  11. Interactomes: Experimental and In Silico Approaches.Advances in experimental medicine and biology · 2021
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  12. Review
  13. Pectin Synthesis and Pollen Tube Growth inFrontiers in plant science · 2020
    Article
  14. Article
  15. Review
  16. FRETting about the affinity of bimolecular protein-protein interactions.Protein science : a publication of the Protein Society · 2018
    Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Christian H LundUniversity of Copenhagen, Department of Plant Biology and Biotechnology, Frederiksberg, DK-1871, Denmark.
Jennifer R BromleyUniversity of Copenhagen, Department of Plant Biology and Biotechnology, Frederiksberg, DK-1871, Denmark Joint BioEnergy Institute, Feedstocks Division, Emeryville, CA 94608, USA Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Anne StenbækUniversity of Copenhagen, Department of Plant Biology and Biotechnology, Frederiksberg, DK-1871, Denmark.
Randi E RasmussenUniversity of Copenhagen, Department of Plant Biology and Biotechnology, Frederiksberg, DK-1871, Denmark.
Henrik V SchellerJoint BioEnergy Institute, Feedstocks Division, Emeryville, CA 94608, USA Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA.
Yumiko SakuragiUniversity of Copenhagen, Department of Plant Biology and Biotechnology, Frederiksberg, DK-1871, Denmark ysa@plen.ku.dk.
University of Copenhagen · DKJoint BioEnergy Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A growing body of evidence suggests that protein-protein interactions (PPIs) occur amongst glycosyltransferases (GTs) required for plant glycan biosynthesis (e.g. cell wall polysaccharides and N-glycans) in the Golgi apparatus, and may control the functions of these enzymes. However, identification of PPIs in the endomembrane system in a relatively fast and simple fashion is technically challenging, hampering the progress in understanding the functional coordination of the enzymes in Golgi glycan biosynthesis. To solve the challenges, we adapted and streamlined a reversible Renilla luciferase protein complementation assay (Rluc-PCA), originally reported for use in human cells, for transient expression in Nicotiana benthamiana. We tested Rluc-PCA and successfully identified luminescence complementation amongst Golgi-localizing GTs known to form a heterodimer (GAUT1 and GAUT7) and those which homooligomerize (ARAD1). In contrast, no interaction was shown between negative controls (e.g. GAUT7, ARAD1, IRX9). Rluc-PCA was used to investigate PPIs amongst Golgi-localizing GTs involved in biosynthesis of hemicelluloses. Although no PPI was identified among six GTs involved in xylan biosynthesis, Rluc-PCA confirmed three previously proposed interactions and identified seven novel PPIs amongst GTs involved in xyloglucan biosynthesis. Notably, three of the novel PPIs were confirmed by a yeast-based split-ubiquitin assay. Finally, Gateway-enabled expression vectors were generated, allowing rapid construction of fusion proteins to the Rluc reporters and epitope tags. Our results show that Rluc-PCA coupled with transient expression in N. benthamiana is a fast and versatile method suitable for analysis of PPIs between Golgi resident proteins in an easy and mid-throughput fashion in planta.

Indexed as

Agrobacterium tumefaciensGenetic EngineeringGlucansGolgi ApparatusLuciferases, RenillaNicotianaPlant ProteinsProtein Interaction MappingXylansGlucansLuciferases, RenillaPlant ProteinsXylansxyloglucanArabidopsis thalianaglycosyltransferaseGolgi apparatusNicotiana benthamianaplant cell wallpolysaccharidesprotein–protein interactionRenilla luciferasetype II membrane proteinxyloglucan.

Identifiers

PMID25326916
PMCPMC4265154
OpenAlexW2147545140

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.