Evidence map›Paper›PMID 25324969›Full record

ReviewGigaScience2014

Between two fern genomes.

Emily B Sessa, Jo Ann Banks, Michael S Barker, Joshua P Der, Aaron M Duffy, Sean W Graham, Mitsuyasu Hasebe, Jane Langdale, Fay-Wei Li, D Blaine Marchant and 9 more

Open access · goldAbstract readReview
PubMed Full text at PMC Publisher
In one paragraph

Review in GigaScience, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
23.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. The biology ofeLife · 2022
    Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Plant science's next top models.Annals of botany · 2020
    Review
  15. Article
  16. Dating Whole Genome Duplication inInternational journal of molecular sciences · 2019
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 12 institutions in 4 countries.

Emily B SessaDepartment of Biology, Box 118525, University of Florida, Gainesville, FL 32611, USA ; Genetics Institute, University of Florida, Box 103610, Gainesville, FL 32611, USA.
Jo Ann BanksDepartment of Botany and Plant Pathology, Purdue University, 915 West State Street, West Lafayette, IN 47907, USA.
Michael S BarkerDepartment of Ecology & Evolutionary Biology, University of Arizona, 1041 East Lowell Street, Tucson, AZ 85721, USA.
Joshua P DerDepartment of Biology, Penn State University, 201 Life Science Building, University Park, PA 16801, USA ; Current address: Department of Biological Science, California State University, 800 N. State College Blvd., Fullerton, CA 92831, USA.
Aaron M DuffyEcology Center and Department of Biology, Utah State University, 5305 Old Main Hill, Logan, UT 84322, USA.
Sean W GrahamDepartment of Botany, University of British Columbia, 3529-6720 University Blvd., Vancouver, BC V6T 1Z4, Canada.
Mitsuyasu HasebeNational Institute for Basic Biology, 38 Nishigounaka, Myo-daiji-cho, Okazaki 444-8585, Japan.
Jane LangdaleDepartment of Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK.
Fay-Wei LiDepartment of Biology, Duke University, Post Office Box 90338, Durham, NC 27708, USA.
D Blaine MarchantDepartment of Biology, Box 118525, University of Florida, Gainesville, FL 32611, USA ; Florida Museum of Natural History, Dickinson Hall, University of Florida, Gainesville, FL 32611, USA.
Kathleen M PryerDepartment of Biology, Duke University, Post Office Box 90338, Durham, NC 27708, USA.
Carl J RothfelsDepartment of Zoology, University of British Columbia, 2329 W. Mall, WAITING Vancouver, BC V6T 1Z4, Canada ; Current address: University Herbarium and Department of Integrative Biology, University of California, 1001 Valley Life Sciences Building, Berkeley, Berkeley, CA 94720, USA.
Stanley J RouxDepartment of Molecular Biosciences, University of Texas, 205 W. 24th Street, Austin, TX 78712, USA.
Mari L SalmiDepartment of Molecular Biosciences, University of Texas, 205 W. 24th Street, Austin, TX 78712, USA.
Erin M SigelDepartment of Biology, Duke University, Post Office Box 90338, Durham, NC 27708, USA.
Douglas E SoltisDepartment of Biology, Box 118525, University of Florida, Gainesville, FL 32611, USA ; Genetics Institute, University of Florida, Box 103610, Gainesville, FL 32611, USA ; Florida Museum of Natural History, Dickinson Hall, University of Florida, Gainesville, FL 32611, USA.
Pamela S SoltisGenetics Institute, University of Florida, Box 103610, Gainesville, FL 32611, USA ; Florida Museum of Natural History, Dickinson Hall, University of Florida, Gainesville, FL 32611, USA.
Dennis W StevensonNew York Botanical Garden, 2900 Southern Boulevard, Bronx, NY 10458, USA.
Paul G WolfEcology Center and Department of Biology, Utah State University, 5305 Old Main Hill, Logan, UT 84322, USA.
Duke University · USFlorida Museum of Natural History · USThe University of Texas at Austin · USUniversity of British Columbia · CAUniversity of Florida · USUtah State University · USCalifornia State University, Fullerton · USNational Institute for Basic Biology · JPNew York Botanical Garden · USState Street (United States) · USUniversity of Arizona · USUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ferns are the only major lineage of vascular plants not represented by a sequenced nuclear genome. This lack of genome sequence information significantly impedes our ability to understand and reconstruct genome evolution not only in ferns, but across all land plants. Azolla and Ceratopteris are ideal and complementary candidates to be the first ferns to have their nuclear genomes sequenced. They differ dramatically in genome size, life history, and habit, and thus represent the immense diversity of extant ferns. Together, this pair of genomes will facilitate myriad large-scale comparative analyses across ferns and all land plants. Here we review the unique biological characteristics of ferns and describe a number of outstanding questions in plant biology that will benefit from the addition of ferns to the set of taxa with sequenced nuclear genomes. We explain why the fern clade is pivotal for understanding genome evolution across land plants, and we provide a rationale for how knowledge of fern genomes will enable progress in research beyond the ferns themselves.

Indexed as

AzollaCeratopterisComparative analysesFernsGenomicsLand plantsMonilophytes

Identifiers

PMID25324969
PMCPMC4199785
OpenAlexW2163434905

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.