ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2015
Early and delayed long-term transcriptional changes and short-term transient responses during cold acclimation in olive leaves.
Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.
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Who cites it
32 citing papers in PubMed, 1 synthesis or guideline pooled it, 72 citations in OpenAlex.
- Meta-analysis of transcriptome reveals key genes relating to oil quality in olive.BMC genomics · 2023Pooled it
- Chitinase genes in olive tree (Frontiers in plant science · 2026Article
- Freeze-Dependent Physiological and Transcriptional Changes inInternational journal of molecular sciences · 2025Article
- Identification and analysis of the GATA gene family in onion (Allium cepa L.) in response to chromium and salt stress.BMC genomics · 2025Article
- Transcriptomic and Metabolomic Analysis Reveals the Potential Roles of Polyphenols and Flavonoids in Response to Sunburn Stress in Chinese Olive (Plants (Basel, Switzerland) · 2024Article
- Article
- OliveAtlas: A Gene Expression Atlas Tool forPlants (Basel, Switzerland) · 2023Article
- Confronting stresses affecting olive cultivation from the holobiont perspective.Frontiers in plant science · 2023Review
- Understanding the Role ofBiology · 2022Article
- Cold Stress, Freezing Adaptation, Varietal Susceptibility ofPlants (Basel, Switzerland) · 2022Review
- Review
- Deciphering the transcriptomic regulation of heat stress responses in Nothofagus pumilio.PloS one · 2021Article
- Coupling the endophytic microbiome with the host transcriptome in olive roots.Computational and structural biotechnology journal · 2021Article
- Several Isoforms for Each Subunit Shared by RNA Polymerases are Differentially Expressed in the Cultivated Olive Tree (Frontiers in molecular biosciences · 2021Article
- Molecular bases of responses to abiotic stress in trees.Journal of experimental botany · 2020Review
- Genome Wild Analysis and Molecular Understanding of the Aquaporin Diversity in Olive Trees (International journal of molecular sciences · 2020Article
- Gene Expression Pattern in Olive Tree Organs (Genes · 2020Article
- Transposon activation is a major driver in the genome evolution of cultivated olive trees (Olea europaea L.).The plant genome · 2020Article
- Association Study of the 5'UTR Intron of theFrontiers in plant science · 2020Article
- Short-Term Low Temperature Induces Nitro-Oxidative Stress that Deregulates the NADP-Malic Enzyme Function by Tyrosine Nitration inAntioxidants (Basel, Switzerland) · 2019Article
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Authors and funding
9 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Low temperature severely affects plant growth and development. To overcome this constraint, several plant species from regions having a cool season have evolved an adaptive response, called cold acclimation. We have studied this response in olive tree (Olea europaea L.) cv. Picual. Biochemical stress markers and cold-stress symptoms were detected after the first 24 h as sagging leaves. After 5 days, the plants were found to have completely recovered. Control and cold-stressed plants were sequenced by Illumina HiSeq 1000 paired-end technique. We also assembled a new olive transcriptome comprising 157,799 unigenes and found 6,309 unigenes differentially expressed in response to cold. Three types of response that led to cold acclimation were found: short-term transient response, early long-term response, and late long-term response. These subsets of unigenes were related to different biological processes. Early responses involved many cold-stress-responsive genes coding for, among many other things, C-repeat binding factor transcription factors, fatty acid desaturases, wax synthesis, and oligosaccharide metabolism. After long-term exposure to cold, a large proportion of gene down-regulation was found, including photosynthesis and plant growth genes. Up-regulated genes after long-term cold exposure were related to organelle fusion, nucleus organization, and DNA integration, including retrotransposons.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.