Evidence map›Paper›PMID 25320561›Full record

ArticleBreeding science2014

Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants.

Kenta Shirasawa, Sachiko Isobe, Satoshi Tabata, Hideki Hirakawa

Abstract read
In one paragraph

Article in Breeding science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Transcriptomic Changes inInternational journal of molecular sciences · 2019
    Article
  8. Expression Analysis ofInternational journal of molecular sciences · 2019
    Article
  9. Article
  10. Fine-mapping and identifying candidate genes conferring resistance to Soybean mosaic virus strain SC20 in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kenta ShirasawaDepartment of Plant Genome Research, Kazusa DNA Research Institute , Kisarazu, Chiba 292-0818 , Japan.
Sachiko IsobeDepartment of Plant Genome Research, Kazusa DNA Research Institute , Kisarazu, Chiba 292-0818 , Japan.
Satoshi TabataDepartment of Plant Genome Research, Kazusa DNA Research Institute , Kisarazu, Chiba 292-0818 , Japan.
Hideki HirakawaDepartment of Plant Genome Research, Kazusa DNA Research Institute , Kisarazu, Chiba 292-0818 , Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In order to provide useful genomic information for agronomical plants, we have established a database, the Kazusa Marker DataBase (http://marker.kazusa.or.jp). This database includes information on DNA markers, e.g., SSR and SNP markers, genetic linkage maps, and physical maps, that were developed at the Kazusa DNA Research Institute. Keyword searches for the markers, sequence data used for marker development, and experimental conditions are also available through this database. Currently, 10 plant species have been targeted: tomato (Solanum lycopersicum), pepper (Capsicum annuum), strawberry (Fragaria × ananassa), radish (Raphanus sativus), Lotus japonicus, soybean (Glycine max), peanut (Arachis hypogaea), red clover (Trifolium pratense), white clover (Trifolium repens), and eucalyptus (Eucalyptus camaldulensis). In addition, the number of plant species registered in this database will be increased as our research progresses. The Kazusa Marker DataBase will be a useful tool for both basic and applied sciences, such as genomics, genetics, and molecular breeding in crops.

Indexed as

cropdatabaseDNA markergenetic linkage map

Identifiers

PMID25320561
PMCPMC4154615

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.