Evidence map›Paper›PMID 25320410›Full record

ReviewIndian journal of microbiology2014

Advances in taxonomy of genus phoma: polyphyletic nature and role of phenotypic traits and molecular systematics.

Mahendra Kumar Rai, Vaibhav V Tiwari, László Irinyi, György János Kövics

Open access · bronzeAbstract readReview
In one paragraph

Review in Indian journal of microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Baseline Data of the Fungal Phytobiome of Three Sorghum (Journal of fungi (Basel, Switzerland) · 2021
    Article
  7. Microorganisms · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Mahendra Kumar RaiDepartment of Biotechnology, S. G. B. Amravati University, Amravati, 444 602 Maharashtra India.
Vaibhav V TiwariDepartment of Biotechnology, S. G. B. Amravati University, Amravati, 444 602 Maharashtra India.
László IrinyiPlant Protection Institute, Debrecen University, P.O. Box 36, Debrecen, 4015 Hungary.
György János KövicsPlant Protection Institute, Debrecen University, P.O. Box 36, Debrecen, 4015 Hungary.
Sant Gadge Baba Amravati University · INUniversity of Debrecen · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phoma is a highly polyphyletic genus with its unclear species boundaries. The conventional system of identification is functional but it has its limitations. Besides morphological studies, chemotaxonomy, secondary metabolite and protein profiling have been assessed for the classification and identification of these fungi. Molecular datasets have provided a better outlook towards the phylogenetic and evolutionary trends of Phoma. Molecular markers such as ITS-rDNA, tubulin, actin, translation elongation factor have been widely used by the taxonomists to demarcate species. However, outcomes gained up till now represent preliminary step towards the study of Phoma systematics and a combined approach would be beneficial in the understanding of this polyphyletic group members. Lately, on the base of molecular phylogeny of the type species of the seven Phoma sections a new teleomorph family, Didymellaceae has been established, besides the Phaeosphaeriaceae related to sect. Paraphoma anamorphs, and the Leptosphaeriaceae to sect. Heterospora anamorphs. The estimated ratio is about 70 % of the recognized Phoma-like species can be associated with the Didymellaceae ascomycetous family.

Indexed as

DidymellaceaeITS-rDNAPhomaSystematicstef1 sequencesTranslation elongation factorβ-tubulin

Identifiers

PMID25320410
PMCPMC4188486
OpenAlexW1983404339

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.