Evidence map›Paper›PMID 25320321›Full record

ArticleJournal of virology2015

Malawi polyomavirus is a prevalent human virus that interacts with known tumor suppressors.

Christian Berrios, Joonil Jung, Blake Primi, Michael Wang, Chandrasekhar Pedamallu, Fujiko Duke, Christina Marcelus, Jingwei Cheng, Robert L Garcea, Matthew Meyerson and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. The Biology and Clinical Features of Cutaneous Polyomaviruses.The Journal of investigative dermatology · 2019
    Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Seroepidemiology of Human Polyomaviruses in a US Population.American journal of epidemiology · 2016
    Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 1 country.

Christian BerriosDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA Program in Virology, Harvard University Graduate School of Arts and Sciences, Division of Medical Sciences, Boston, Massachusetts, USA.
Joonil JungBroad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Blake PrimiDepartment of Molecular, Cellular, and Developmental Biology, University of Colorado, Boulder, Colorado, USA The BioFrontiers Institute, University of Colorado, Boulder, Colorado, USA.
Michael WangDepartment of Pediatrics, University of Colorado School of Medicine, Denver, Colorado, USA.
Chandrasekhar PedamalluDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Fujiko DukeDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Christina MarcelusDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.
Jingwei ChengDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, USA.
Robert L GarceaDepartment of Molecular, Cellular, and Developmental Biology, University of Colorado, Boulder, Colorado, USA The BioFrontiers Institute, University of Colorado, Boulder, Colorado, USA.
Matthew MeyersonDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA Department of Pathology, Harvard Medical School, Boston, Massachusetts, USA.
James A DeCaprioDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA Program in Virology, Harvard University Graduate School of Arts and Sciences, Division of Medical Sciences, Boston, Massachusetts, USA Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, USA james_decaprio@dfci.harvard.edu.
Harvard University · USDana-Farber Cancer Institute · USUniversity of Colorado Boulder · USBrigham and Women's Hospital · USBroad Institute · USUniversity of Colorado Denver · US

Funding

Data Coordinating Center (DCC)for the Consortium for Identification of EnvironmenUC4DK095300 · NIDDK · UNIVERSITY OF SOUTH FLORIDA · PI KRISCHER, JEFFREY P · 2011 to 2011
$56.0M
Data Coordinating CenterU01DK063790 · NIDDK · UNIVERSITY OF SOUTH FLORIDA · PI KRISCHER, JEFFREY P · 2002 to 2006
$50.1M
VIRAL ONCOPROTEIN PERTURBATION OF RB/E2F PATHWAYP01CA050661 · NCI · DANA-FARBER CANCER INSTITUTE · PI HAHN, WILLIAM C. · 1989 to 2013
$35.8M
Establish a Data Coordinating Center (DCC) for the Consortium for Identification UC4DK100238 · NIDDK · UNIVERSITY OF SOUTH FLORIDA · PI KRISCHER, JEFFREY P · 2014 to 2014
$28.9M
The Environmental Determinants of Diabetes in Young (TEDDY0U01DK063863 · NIDDK · HOSPITAL DISTRICT OF SOUTHWEST FINLAND · PI TOPPARI, JORMA · 2003 to 2022
$13.5M
The Environmental Triggers of Diabetes (TEDDY) in SwedenU01DK063861 · NIDDK · UNIVERSITY OF WASHINGTON · PI LERNMARK, AKE · 2003 to 2022
$13.4M
THE TEDDY STUDY - COLORADO CLINICAL CENTERU01DK063821 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI REWERS, MARIAN J · 2003 to 2022
$12.3M
The TEDDY Study: Georgia/Florida Clinical CenterU01DK063865 · NIDDK · MEDICAL COLLEGE OF GEORGIA (MCG) · PI MCINDOE, RICHARD A. · 2003 to 2022
$12.3M
The Environmental Determinants of Diabetes in Youth: Washington Clinical CenterU01DK063829 · NIDDK · PACIFIC NORTHWEST RESEARCH INSTITUTE · PI HAGOPIAN, WILLIAM A. · 2003 to 2022
$11.8M
MOLECULAR BASIS OF VIRAL INFECTIVITYT32AI007245 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI Aaron Gregory Schmidt · 1985 to 2026
$11.3M
MECHANISMS IN POLYOMA VIRUS ASSEMBLYR01CA037667 · NCI · UNIVERSITY OF COLORADO DENVER · PI GARCEA, ROBERT L · 1985 to 2018
$6.3M
Type 1 Diabetes triggers: diet modification in neonatesU01DK063836 · NIDDK · FORSCHERGRUPPE DIABETES E. V. · PI ZIEGLER, ANETTE · 2003 to 2022
$6.2M
NCI NIH HHS F31 CA177274NCI NIH HHS F31CA177274NCI NIH HHS P01 CA050661NCI NIH HHS P01CA050661NCI NIH HHS R01 CA037667NCI NIH HHS R01 CA063113NCI NIH HHS R01 CA093804NCI NIH HHS R01CA63113NCI NIH HHS R01CA93804NIAID NIH HHS 5T32AI007245NIAID NIH HHS T32 AI007245NIDDK NIH HHS DK 63790NIDDK NIH HHS DK 63821NIDDK NIH HHS DK 63829NIDDK NIH HHS DK 63836NIDDK NIH HHS DK 63861NIDDK NIH HHS DK 63863NIDDK NIH HHS DK 63865NIDDK NIH HHS HHSN267200700014CNIDDK NIH HHS U01 DK063829NIDDK NIH HHS UC4 DK063829NIDDK NIH HHS UC4 DK095300NIDDK NIH HHS UC4DK095300NIDDK NIH HHS UC4 DK100238
6 · The paper itself

Abstract

Malawi polyomavirus (MWPyV) is a recently identified human polyomavirus. Serology for MWPyV VP1 indicates that infection frequently occurs in childhood and reaches a prevalence of 75% in adults. The MWPyV small T antigen (ST) binds protein phosphatase 2A (PP2A), and the large T antigen (LT) binds pRb, p107, p130, and p53. However, the MWPyV LT was less stable than the simian virus 40 (SV40) LT and was unable to promote the growth of normal cells. This report confirms that MWPyV is a widespread human virus expressing T antigens with low transforming potential.

Indexed as

Host-Pathogen InteractionsAdolescentAdultAgedAged, 80 and overAntigens, Viral, TumorChildChild, PreschoolDNA, ViralFemaleHumansInfantMaleMiddle AgedMolecular Sequence DataPolyomavirusAntigens, Viral, TumorDNA, ViralTumor Suppressor Proteins

Identifiers

PMID25320321
PMCPMC4301141
OpenAlexW2021175606

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.