Evidence map›Paper›PMID 25320094›Full record

ArticleThe Journal of biological chemistry2014

Identification and structural analysis of an L-asparaginase enzyme from guinea pig with putative tumor cell killing properties.

Amanda M Schalk, Hien-Anh Nguyen, Coraline Rigouin, Arnon Lavie

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Article
  7. Article
  8. Towards a dependable data set of structures for L-asparaginase research.Acta crystallographica. Section D, Structural biology · 2024
    Article
  9. Article
  10. Article
  11. A Structural In Silico Analysis of the Immunogenicity of L-Asparaginase fromInternational journal of molecular sciences · 2024
    Article
  12. Article
  13. In Silico Design of a Chimeric Humanized L-asparaginase.International journal of molecular sciences · 2023
    Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Review
  19. Highly Active Thermophilic L-Asparaginase fromInternational journal of molecular sciences · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Amanda M SchalkFrom the Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois 60607.
Hien-Anh NguyenFrom the Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois 60607.
Coraline RigouinFrom the Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois 60607.
Arnon LavieFrom the Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois 60607 lavie@uic.edu.
University of Illinois Chicago · US

Funding

Enzyme-delivery scaffold technology for targeted cancer killing.R21CA155424 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KAY, BRIAN KENNETH, LAVIE, ARNON · 2011 to 2013
$649k
NCI NIH HHS R21 CA155424NHLBI NIH HHS T32 HL0507692
6 · The paper itself

Abstract

The initial observation that guinea pig serum kills lymphoma cells marks the serendipitous discovery of a new class of anti-cancer agents. The serum cell killing factor was shown to be an enzyme with L-asparaginase (ASNase) activity. As a direct result of this observation, several bacterial L-asparaginases were developed and are currently approved by the Food and Drug Administration for the treatment of the subset of hematological malignancies that are dependent on the extracellular pool of the amino acid asparagine. As drugs, these enzymes act to hydrolyze asparagine to aspartate, thereby starving the cancer cells of this amino acid. Prior to the work presented here, the precise identity of this guinea pig enzyme has not been reported in the peer-reviewed literature. We discovered that the guinea pig enzyme annotated as H0W0T5_CAVPO, which we refer to as gpASNase1, has the required low Km property consistent with that possessed by the cell-killing guinea pig serum enzyme. Elucidation of the ligand-free and aspartate complex gpASNase1 crystal structures allows a direct comparison with the bacterial enzymes and serves to explain the lack of L-glutaminase activity in the guinea pig enzyme. The structures were also used to generate a homology model for the human homolog hASNase1 and to help explain its vastly different kinetic properties compared with gpASNase1, despite a 70% sequence identity. Given that the bacterial enzymes frequently present immunogenic and other toxic side effects, this work suggests that gpASNase1 could be a promising alternative to these bacterial enzymes.

Indexed as

AnimalsAntineoplastic AgentsAsparaginaseBacterial ProteinsCrystallography, X-RayGuinea PigsHumansRecombinant ProteinsStructural Homology, ProteinAntineoplastic AgentsAsparaginaseBacterial ProteinsRecombinant ProteinsAnticancer DrugAsparaginaseCancerCancer TherapyCrystallographyEnzyme Kinetics

Identifiers

PMID25320094
PMCPMC4246078
OpenAlexW2061170330

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.