Evidence map›Paper›PMID 25320091›Full record

ArticleThe Journal of biological chemistry2014

Oligomerization, membrane association, and in vivo phosphorylation of sugarcane UDP-glucose pyrophosphorylase.

Jose Sergio M Soares, Agustina Gentile, Valeria Scorsato, Aline da C Lima, Eduardo Kiyota, Marcelo Leite Dos Santos, Claudia V Piattoni, Steven C Huber, Ricardo Aparicio, Marcelo Menossi

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Exploring Redox Modulation of Plant UDP-Glucose Pyrophosphorylase.International journal of molecular sciences · 2023
    Article
  3. Article
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Jose Sergio M SoaresFrom the Departamento de Genética, Evolução e Bioagentes, Instituto de Biologia, Universidade Estadual de Campinas, Rua Monteiro Lobato, 255, C.P. 6109, Campinas, SP, Brazil.
Agustina GentileFrom the Departamento de Genética, Evolução e Bioagentes, Instituto de Biologia, Universidade Estadual de Campinas, Rua Monteiro Lobato, 255, C.P. 6109, Campinas, SP, Brazil.
Valeria Scorsatothe Laboratório de Biologia Estrutural e Cristalografia, Instituto de Química, Universidade Estadual de Campinas, C.P. 6154, Campinas, SP, Brazil.
Aline da C Limathe Laboratório de Biologia Estrutural e Cristalografia, Instituto de Química, Universidade Estadual de Campinas, C.P. 6154, Campinas, SP, Brazil.
Eduardo Kiyotathe Laboratório de Biologia Estrutural e Cristalografia, Instituto de Química, Universidade Estadual de Campinas, C.P. 6154, Campinas, SP, Brazil.
Marcelo Leite Dos Santosthe Centro de Ciências Exatas e Tecnologia, Núcleo de Química, Universidade Federal do Sergipe, C.P. 49500000, Itabaiana, SE, Brazil.
Claudia V Piattonithe Instituto de Agrobiotecnologia del Litoral (UNL-CONICET), Universidad Nacional del Litoral, Ciudad Universitaria-Paraje El Pozo, CC242, S3000ZAA Santa Fe, Argentina.
Steven C Huberthe Department of Agriculture Agricultural Research Service, and Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801.
Ricardo Apariciothe Laboratório de Biologia Estrutural e Cristalografia, Instituto de Química, Universidade Estadual de Campinas, C.P. 6154, Campinas, SP, Brazil.
Marcelo MenossiFrom the Departamento de Genética, Evolução e Bioagentes, Instituto de Biologia, Universidade Estadual de Campinas, Rua Monteiro Lobato, 255, C.P. 6109, Campinas, SP, Brazil, menossi@lgf.ib.unicamp.br.
Universidade Estadual de Campinas (UNICAMP) · BRNational University of the Littoral · ARUniversidade Federal de Sergipe · BRUniversity of Illinois Urbana-Champaign · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sugarcane is a monocot plant that accumulates sucrose to levels of up to 50% of dry weight in the stalk. The mechanisms that are involved in sucrose accumulation in sugarcane are not well understood, and little is known with regard to factors that control the extent of sucrose storage in the stalks. UDP-glucose pyrophosphorylase (UGPase; EC 2.7.7.9) is an enzyme that produces UDP-glucose, a key precursor for sucrose metabolism and cell wall biosynthesis. The objective of this work was to gain insights into the ScUGPase-1 expression pattern and regulatory mechanisms that control protein activity. ScUGPase-1 expression was negatively correlated with the sucrose content in the internodes during development, and only slight differences in the expression patterns were observed between two cultivars that differ in sucrose content. The intracellular localization of ScUGPase-1 indicated partial membrane association of this soluble protein in both the leaves and internodes. Using a phospho-specific antibody, we observed that ScUGPase-1 was phosphorylated in vivo at the Ser-419 site in the soluble and membrane fractions from the leaves but not from the internodes. The purified recombinant enzyme was kinetically characterized in the direction of UDP-glucose formation, and the enzyme activity was affected by redox modification. Preincubation with H2O2 strongly inhibited this activity, which could be reversed by DTT. Small angle x-ray scattering analysis indicated that the dimer interface is located at the C terminus and provided the first structural model of the dimer of sugarcane UGPase in solution.

Indexed as

Cell MembraneGene Expression Regulation, EnzymologicGene Expression Regulation, PlantModels, MolecularPhosphorylationPlant ProteinsPlant StemsProtein Structure, TertiarySaccharumUridine Diphosphate GlucoseUTP-Glucose-1-Phosphate UridylyltransferasePlant ProteinsUridine Diphosphate GlucoseUTP-Glucose-1-Phosphate UridylyltransferaseGene ExpressionKineticsProtein PhosphorylationRedox RegulationSmall Angle X-ray Scattering (SAXS)Sucrose

Identifiers

PMID25320091
PMCPMC4246093
OpenAlexW1988004640

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.