Evidence map›Paper›PMID 25320007›Full record

ArticleCancer research2014

Nuclear factor of activated T-cell activity is associated with metastatic capacity in colon cancer.

Manish K Tripathi, Natasha G Deane, Jing Zhu, Hanbing An, Shinji Mima, Xiaojing Wang, Sekhar Padmanabhan, Zhiao Shi, Naresh Prodduturi, Kristen K Ciombor and 4 more

Registry-linked trialAbstract read
In one paragraph

Article in Cancer research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00899626 (Novel Colon Cancer Markers in Gastrointestinal Tissue and Biofluids), which is not on this map. Cited by 91 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00899626 recruitingnot on this map

Novel Colon Cancer Markers in Gastrointestinal Tissue and Biofluids

TypeobservationalSponsorVanderbilt University Medical CenterRan2002 to 2045Enrolled5,000ConditionsColorectal Cancer, Esophageal Cancer, Gastric Cancer, Pancreatic Cancer
3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Prognostic and predictive values of CXCL10 in colorectal cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2020
    Pooled it
  2. Multi-omics characterization of a GPRC5AJournal of translational medicine · 2026
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31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Manish K TripathiDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee.
Natasha G DeaneDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee. Vanderbilt Ingram Cancer Center, Vanderbilt University Medical Center, Nashville, Tennessee.
Jing ZhuDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee.
Hanbing AnDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee.
Shinji MimaDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee.
Xiaojing WangDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee.
Sekhar PadmanabhanDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee.
Zhiao ShiAdvanced Computing Center for Research & Education, Vanderbilt University, Nashville, Tennessee.
Naresh ProdduturiDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee.
Kristen K CiomborDivision of Medical Oncology, Department of Internal Medicine, The Ohio State University Comprehensive Cancer Center, Columbus, Ohio.
Xi ChenDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, Tennessee.
M Kay WashingtonDepartment of Pathology, Vanderbilt University Medical Center, Nashville, Tennessee.
Bing ZhangVanderbilt Ingram Cancer Center, Vanderbilt University Medical Center, Nashville, Tennessee. Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee. Department of Cancer Biology, Vanderbilt University Medical Center, Nashville, Tennessee. dan.beauchamp@vanderbilt.edu bing.zhang@vanderbilt.edu.
R Daniel BeauchampDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee. Vanderbilt Ingram Cancer Center, Vanderbilt University Medical Center, Nashville, Tennessee. Department of Cancer Biology, Vanderbilt University Medical Center, Nashville, Tennessee. Department of Cell and Development Biology, Vanderbilt University Medical Center, Nashville, Tennessee. dan.beauchamp@vanderbilt.edu bing.zhang@vanderbilt.edu.

Funding

VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Understanding and Controlling p120 Dysfunction in CRCP50CA095103 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI COFFEY, ROBERT J. · 2002 to 2017
$33.6M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Vanderbilt Clinical Oncology Research Career Development ProgramK12CA090625 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Debra L. Friedman, Paula Jill Hurley · 2001 to 2026
$16.9M
Integrative prediction models for metastasis risk in colon cancerR01CA158472 · NCI · VANDERBILT UNIVERSITY · PI BEAUCHAMP, ROBERT DANIEL, CHEN, XI STEVEN · 2012 to 2016
$2.3M
Systems Approach to the Biological Basis of Colon Cancer MetastasesR01GM088822 · NIGMS · VANDERBILT UNIVERSITY · PI BEAUCHAMP, ROBERT DANIEL, ZHANG, BING · 2009 to 2012
$1.5M
Causal Role for DNMT1 in C-T Mutations and TumorigenesisF32CA094664 · NCI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI BOYER, LAURIE A · 2002 to 2004
$134k
NCATS NIH HHS UL1 TR000445NCI NIH HHS CA0684845NCI NIH HHS CA095103NCI NIH HHS CA158472NCI NIH HHS F32 CA094664NCI NIH HHS K12 CA090625NCI NIH HHS K12 CA9060625NCI NIH HHS P50 CA095103NCI NIH HHS R01 CA158472NCI NIH HHS U01CA094664NCRR NIH HHS UL1 RR024975NCRR NIH HHS UL1RR024975NIDDK NIH HHS DK058404NIDDK NIH HHS P30 DK058404NIGMS NIH HHS GM088822NIGMS NIH HHS R01 GM088822
6 · The paper itself

Abstract

Metastatic recurrence is the leading cause of cancer-related deaths in patients with colorectal carcinoma. To capture the molecular underpinnings for metastasis and tumor progression, we performed integrative network analysis on 11 independent human colorectal cancer gene expression datasets and applied expression data from an immunocompetent mouse model of metastasis as an additional filter for this biologic process. In silico analysis of one metastasis-related coexpression module predicted nuclear factor of activated T-cell (NFAT) transcription factors as potential regulators for the module. Cells selected for invasiveness and metastatic capability expressed higher levels of NFATc1 as compared with poorly metastatic and less invasive parental cells. We found that inhibition of NFATc1 in human and mouse colon cancer cells resulted in decreased invasiveness in culture and downregulation of metastasis-related network genes. Overexpression of NFATc1 significantly increased the metastatic potential of colon cancer cells, whereas inhibition of NFATc1 reduced metastasis growth in an immunocompetent mouse model. Finally, we found that an 8-gene signature comprising genes upregulated by NFATc1 significantly correlated with worse clinical outcomes in stage II and III colorectal cancer patients. Thus, NFATc1 regulates colon cancer cell behavior and its transcriptional targets constitute a novel, biologically anchored gene expression signature for the identification of colon cancers with high risk of metastatic recurrence.

Indexed as

AnimalsCell Line, TumorColonic NeoplasmsGene Expression Regulation, NeoplasticHCT116 CellsHT29 CellsHumansMiceNeoplasm InvasivenessNeoplasm MetastasisNFATC Transcription FactorsTranscription FactorsNFATC Transcription FactorsTranscription Factors

Identifiers

PMID25320007
PMCPMC4252979

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.