Evidence map›Paper›PMID 25319845›Full record

ArticleEuropean journal of pediatrics2015

Sequencing of the DKK1 gene in patients with anorectal malformations and hypospadias.

Romy van de Putte, Charlotte H W Wijers, Ivo de Blaauw, Wout F J Feitz, Carlo L M Marcelis, Marina Hakobjan, Cornelius E J Sloots, Yolande van Bever, Han G Brunner, Nel Roeleveld and 2 more

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Article in European journal of pediatrics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Romy van de PutteDepartment for Health Evidence (133), Radboud university medical center, P.O. Box 9101, 6500 HB, Nijmegen, The Netherlands, Romy.vandePutte@radboudumc.nl.
Charlotte H W Wijers
Ivo de Blaauw
Wout F J Feitz
Carlo L M Marcelis
Marina Hakobjan
Cornelius E J Sloots
Yolande van Bever
Han G Brunner
Nel Roeleveld
Iris A L M van Rooij
Loes F M van der Zanden
Radboud University Nijmegen · NLRadboud University Medical Center · NLErasmus MC - Sophia Children’s Hospital · NLErasmus University Rotterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledAnorectal malformations (ARM) are rare congenital malformations of the gastrointestinal tract. Approximately 60% of the patients have additional congenital malformations, such as hypospadias. A recently published article showed that deletion of one single gene, dickkopf WNT signaling pathway inhibitor-1 (Dkk1), resulted in an imperforate anus with rectourinary fistula and preputial hypospadias in mice. To determine whether DKK1 also plays a role in the etiology of ARM and hypospadias in humans, we sequenced the four exons of the DKK1 gene in 17 patients affected with both ARM and hypospadias. No new potential disease-causing variant was identified. However, we detected a known non-synonymous variant in one patient, which was predicted in silico to be damaging, and the corresponding unaffected amino acid is highly conserved.

conclusionIn this human study, a potential interesting non-synonymous variant was found in the DKK1 gene. Whether this variant plays a contributory role in the genesis of ARM or hypospadias would require a much larger study.

Indexed as

Anorectal MalformationsAnus, ImperforateDNAGenetic VariationHumansHypospadiasIntercellular Signaling Peptides and ProteinsMalePolymerase Chain ReactionSequence Analysis, DNADKK1 protein, humanDNAIntercellular Signaling Peptides and Proteins

Identifiers

PMID25319845
OpenAlexW2051471530

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.