Evidence map›Paper›PMID 25319677›Full record

ArticleExtremophiles : life under extreme conditions2015

Characterization of Alkaliphilus hydrothermalis sp. nov., a novel alkaliphilic anaerobic bacterium, isolated from a carbonaceous chimney of the Prony hydrothermal field, New Caledonia.

Fatma Ben Aissa, Anne Postec, Gaël Erauso, Claude Payri, Bernard Pelletier, Moktar Hamdi, Marie-Laure Fardeau, Bernard Ollivier

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Article in Extremophiles : life under extreme conditions, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Habitability of the marine serpentinite subsurface: a case study of the Lost City hydrothermal field.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2020
    Article
  4. Article
  5. Article
  6. List of new names and new combinations previously effectively, but not validly, published.International journal of systematic and evolutionary microbiology · 2017
    Article
  7. Article
  8. Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Fatma Ben AissaIRD, Mediterranean Institute of Oceanography (MIO), CNRS/INSU, Aix-Marseille Université, Université du Sud Toulon-Var, UM 110, 13288, Marseille Cedex 09, France.
Anne Postec
Gaël Erauso
Claude Payri
Bernard Pelletier
Moktar Hamdi
Marie-Laure Fardeau
Bernard Ollivier
Centre National de la Recherche Scientifique · FRAix-Marseille Université · FRGéoazur · FRInstitut de Recherche pour le Développement · NCNational Institute of Applied Science and Technology · TN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel anaerobic, alkaliphilic, Gram-positive staining bacterium was isolated from a hydrothermal chimney in the Prony Bay, New Caledonia. This strain designated FatMR1(T) grew at temperatures from 20 to 55 °C (optimum 37 °C) and at pH between 7.5 and 10.5 (optimum 8.8-9). NaCl is not required for growth (optimum 0.2-0.5%), but is tolerated up to 3%. Sulfate, thiosulfate, elemental sulfur, sulfite, nitrate and nitrite are not used as terminal electron acceptors. Strain FatMR1(T) fermented pyruvate, yeast extract, peptone and biotrypcase and used fructose as the only sugar. The main fermentation products from fructose and proteinaceous compounds (e.g. peptone and biotrypcase) were acetate, H2 and CO2. Crotonate was disproportionated to acetate and butyrate. The predominant cellular fatty acids were C14:0 and C16:0. The G + C content of the genomic DNA was 37.1 mol%. On the basis of phylogenetic, genetic, and physiological properties, strain FatMR1(T) (=DSM 25890(T), =JCM 18390(T)) belonging to the phylum Firmicutes, class Clostridia, order Clostridiales, is proposed as a novel species of the genus Alkaliphilus, A. hydrothermalis sp. nov.

Indexed as

PhylogenyAnaerobiosisBase CompositionCarbonDNA, BacterialFatty AcidsFermentationFructoseGram-Positive BacteriaHydrogen-Ion ConcentrationHydrothermal VentsNew CaledoniaNucleic Acid HybridizationRNA, Ribosomal, 16STemperatureCarbonDNA, BacterialFatty AcidsFructoseRNA, Ribosomal, 16S

Identifiers

PMID25319677
OpenAlexW2067301091

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.