Evidence map›Paper›PMID 25319482›Full record

ArticleJournal of integrative plant biology2015

Infection of Ustilaginoidea virens intercepts rice seed formation but activates grain-filling-related genes.

Jing Fan, Xiao-Yi Guo, Liang Li, Fu Huang, Wen-Xian Sun, Yan Li, Yan-Yan Huang, Yong-Ju Xu, Jun Shi, Yang Lei and 2 more

Abstract read
In one paragraph

Article in Journal of integrative plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

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  15. Review
  16. Diversity Analysis of the Rice False Smut PathogenJournal of fungi (Basel, Switzerland) · 2022
    Article
  17. The Adaptor Protein UvSte50 Governs Fungal Pathogenicity ofJournal of fungi (Basel, Switzerland) · 2022
    Article
  18. International journal of molecular sciences · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jing FanRice Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.
Xiao-Yi GuoRice Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.
Liang LiRice Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.
Fu HuangCollege of Agronomy, Sichuan Agricultural University, Chengdu, 611130, China.
Wen-Xian SunDepartment of Plant Pathology, China Agricultural University, Beijing, 100193, China.
Yan LiRice Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.
Yan-Yan HuangRice Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.
Yong-Ju XuRice Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.
Jun ShiCollege of Agronomy, Sichuan Agricultural University, Chengdu, 611130, China.
Yang LeiRice Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.
Ai-Ping ZhengRice Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.
Wen-Ming WangRice Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice false smut has become an increasingly serious disease in rice (Oryza sativa L.) production worldwide. The typical feature of this disease is that the fungal pathogen Ustilaginoidea virens (Uv) specifically infects rice flower and forms false smut ball, the ustiloxin-containing ball-like fungal colony, of which the size is usually several times larger than that of a mature rice seed. However, the underlying mechanisms of Uv-rice interaction are poorly understood. Here, we applied time-course microscopic and transcriptional approaches to investigate rice responses to Uv infection. The results demonstrated that the flower-opening process and expression of associated transcription factors, including ARF6 and ARF8, were inhibited in Uv-infected spikelets. The ovaries in infected spikelets were interrupted in fertilization and thus were unable to set seeds. However, a number of grain-filling-related genes, including seed storage protein genes, starch anabolism genes and endosperm-specific transcription factors (RISBZ1 and RPBF), were highly transcribed as if the ovaries were fertilized. In addition, critical defense-related genes like NPR1 and PR1 were downregulated by Uv infection. Our data imply that Uv may hijack host nutrient reservoir by activation of the grain-filling network because of growth and formation of false smut balls.

Indexed as

Gene Expression Regulation, PlantGenes, PlantFertilizationFlowersGenes, EssentialHost-Pathogen InteractionsOryzaPlant DiseasesSeedsStress, PhysiologicalTime FactorsTranscription, GeneticUstilaginalesFlower-infectinggrain fillingmicroscopyrice false smutRNA-Seq

Identifiers

PMID25319482
PMCPMC5024071

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.