Evidence map›Paper›PMID 25319049›Full record

ArticleInternational journal of molecular medicine2014

Zinc finger protein 382 is downregulated by promoter hypermethylation in pediatric acute myeloid leukemia patients.

Yan-Fang Tao, Shao-Yan Hu, Jun Lu, Lan Cao, Wen-Li Zhao, Pei-Fang Xiao, Li-Xiao Xu, Zhi-Heng Li, Na-Na Wang, Xiao-Juan Du and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in International journal of molecular medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Genetic Factors and Long-term Treatment-Related Neurocognitive Deficits, Anxiety, and Depression in Childhood Leukemia Survivors: An Exome-Wide Association Study.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 3 institutions in 1 country.

Yan-Fang TaoDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Shao-Yan HuDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Jun LuDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Lan CaoDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Wen-Li ZhaoDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Pei-Fang XiaoDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Li-Xiao XuDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Zhi-Heng LiDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Na-Na WangDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Xiao-Juan DuDepartment of Gastroenterology, The 5th Hospital of Chinese PLA, Yinchuan, Ningxia, P.R. China.
Li-Chao SunDepartment of Cell and Molecular Biology, Cancer Institute (Hospital), Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, P.R. China.
He ZhaoDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Fang FangDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Guang-Hao SuDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Yan-Hong LiDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Yi-Ping LiDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Yun-Yun XuDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Jian NiTranslational Research Center, Second Hospital, The Second Clinical School, Nanjing Medical University, Nanjing, Jiangsu, P.R. China.
Jian WangDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Xing FengDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Jian PanDepartment of Hematology and Oncology, Children's Hospital of Soochow University, Suzhou, Jiangsu, P.R. China.
Soochow University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNSecond Affiliated Hospital of Nanjing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acute myeloid leukemia (AML) is the second-most common form of leukemia in children. Aberrant DNA methylation patterns are characteristic of AML. Zinc finger protein 382 (ZNF382) has been suggested to be a tumor suppressor gene possibly regulated by promoter hypermethylation in various types of human cancer. However, ZNF382 expression and methylation status in pediatric AML is unknown. In the present study, ZNF382 transcription levels were evaluated by quantitative reverse-transcription PCR. Methylation status was investigated by methylation-specific (MSP) PCR and bisulfate genomic sequencing (BGS). The prognostic significance of ZNF382 expression and promoter methylation was assessed in 105 cases of pediatric AML. The array data suggested that the ZNF382 promoter was hypermethylated in the AML cases examined. MSP PCR and BGS analysis revealed that ZNF382 was hypermethylated in leukemia cell lines. Furthermore, treatment with 5-aza-2'-deoxycytidine (5-Aza) upregulated ZNF382 expression in the selected leukemia cell lines. The aberrant methylation of ZNF382 was observed in 10% (2/20) of the control samples compared with 26.7% (28/105) of the AML samples. ZNF382 expression was significantly decreased in the 105 AML patients compared with the controls. Patients with ZNF382 methylation showed lower ZNF382 transcript levels compared with patients exhibiting no methylation. There were no significant differences in clinical characteristics or cytogenetic analysis between the patients with or without ZNF382 methylation. ZNF382 methylation correlated with minimal residual disease (MRD). Kaplan-Meier survival analysis revealed similar survival times in the samples with ZNF382 methylation, and multivariate analysis revealed that ZNF382 methylation was not an independent prognostic factor in pediatric AML. The epigenetic inactivation of ZNF382 by promoter hypermethylation can be observed in AML cell lines and pediatric AML samples. Therefore, our study suggests that ZNF382 may be considered a putative tumor suppressor gene in pediatric AML. However, further studies focusing on the mechanisms responsible for ZNF382 downregulation in pediatric leukemia are required.

Indexed as

DNA MethylationDown-RegulationAcute DiseaseAzacitidineCell Line, TumorChildDecitabineDNA-Binding ProteinsEnzyme InhibitorsFemaleGene Expression Regulation, LeukemicHL-60 CellsHumansJurkat CellsK562 CellsKaplan-Meier EstimateAzacitidineDecitabineDNA-Binding ProteinsEnzyme InhibitorsTranscription FactorsZNF382 protein, human

Identifiers

PMID25319049
PMCPMC4214337
OpenAlexW2072581855

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.